Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.61□□□□□ -1.67
LONRF3Q496Y0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LONRF3Q496Y0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.61□□□□□ -1.67
LONRF3Q496Y0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LONRF3Q496Y0 AC005832.2-201ENST00000538921 1430 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.61□□□□□ -1.67
LONRF3Q496Y0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
LONRF3Q496Y0 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.6□□□□□ -1.67
LONRF3Q496Y0 AC116667.1-201ENST00000604855 2072 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 AC006378.2-201ENST00000623178 2476 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 RNU6-297P-201ENST00000384636 107 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LONRF3Q496Y0 RN7SKP266-201ENST00000410232 287 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 RNU4-65P-201ENST00000410473 140 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 FCF1P9-201ENST00000412546 282 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.6□□□□□ -1.67
LONRF3Q496Y0 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.6□□□□□ -1.67
LONRF3Q496Y0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.6□□□□□ -1.67
LONRF3Q496Y0 RPL23AP46-201ENST00000438548 490 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 AL022238.1-201ENST00000442557 355 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.6□□□□□ -1.67
LONRF3Q496Y0 AC234775.1-201ENST00000454247 670 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 SNRPFP4-201ENST00000456366 242 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 RPL36AP13-201ENST00000457490 317 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 AC104563.1-201ENST00000476147 376 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 AL132838.2-201ENST00000492041 314 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 AC093278.1-201ENST00000494700 600 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.6□□□□□ -1.67
LONRF3Q496Y0 RN7SKP13-201ENST00000515933 244 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 RNU1-61P-201ENST00000516107 151 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 COX6CP8-201ENST00000522620 226 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 SNRPGP16-201ENST00000533275 226 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.6□□□□□ -1.67
LONRF3Q496Y0 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.6□□□□□ -1.67
LONRF3Q496Y0 AC009063.1-201ENST00000563342 702 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.6□□□□□ -1.67
LONRF3Q496Y0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.6□□□□□ -1.67
LONRF3Q496Y0 MIR4307-201ENST00000582802 84 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 AC068790.5-201ENST00000602741 355 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 AC104662.1-201ENST00000604448 511 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 AL360181.4-201ENST00000621752 134 ntBASIC4.6□□□□□ -1.67
LONRF3Q496Y0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LONRF3Q496Y0 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LONRF3Q496Y0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.6□□□□□ -1.67
LONRF3Q496Y0 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LONRF3Q496Y0 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
LONRF3Q496Y0 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LONRF3Q496Y0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LONRF3Q496Y0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.6□□□□□ -1.67
LONRF3Q496Y0 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LONRF3Q496Y0 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.59□□□□□ -1.67
LONRF3Q496Y0 RNU6-97P-201ENST00000363387 104 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 RNU6-173P-201ENST00000364215 104 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 Y_RNA.234-201ENST00000364409 97 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 SNORA40.3-201ENST00000390964 122 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.59□□□□□ -1.67
LONRF3Q496Y0 OR1AA1P-201ENST00000419597 916 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LONRF3Q496Y0 RPL7P2-201ENST00000427639 268 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.59□□□□□ -1.67
LONRF3Q496Y0 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.59□□□□□ -1.67
LONRF3Q496Y0 AL359073.1-201ENST00000448036 403 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 AL451050.1-201ENST00000450126 415 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 USP9YP12-201ENST00000450481 570 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 RPL23AP31-201ENST00000456160 467 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 OR6K1P-201ENST00000456766 971 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.59□□□□□ -1.67
LONRF3Q496Y0 AC138853.1-201ENST00000503549 823 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.59□□□□□ -1.67
LONRF3Q496Y0 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.59□□□□□ -1.67
LONRF3Q496Y0 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.59□□□□□ -1.67
LONRF3Q496Y0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
LONRF3Q496Y0 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LONRF3Q496Y0 AC108064.1-201ENST00000513791 460 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 RN7SKP298-201ENST00000515950 94 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 PAICSP4-201ENST00000517543 1253 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 AC023632.4-201ENST00000517783 191 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.59□□□□□ -1.67
LONRF3Q496Y0 MTND4LP18-201ENST00000526864 291 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
LONRF3Q496Y0 AC018555.1-201ENST00000567548 1980 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 OR4K8P-201ENST00000578842 1048 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.59□□□□□ -1.67
LONRF3Q496Y0 AC091152.2-201ENST00000591628 2569 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.59□□□□□ -1.67
LONRF3Q496Y0 AC138749.5-201ENST00000611461 208 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 AL391261.4-201ENST00000616012 481 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 AC116165.2-201ENST00000616705 206 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 MIR7151-201ENST00000617477 60 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 XIST_intron.1-201ENST00000619444 68 ntBASIC4.59□□□□□ -1.67
LONRF3Q496Y0 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LONRF3Q496Y0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
LONRF3Q496Y0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.59□□□□□ -1.68
LONRF3Q496Y0 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
LONRF3Q496Y0 AL136164.4-201ENST00000625013 2135 ntBASIC4.58□□□□□ -1.68
LONRF3Q496Y0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.58□□□□□ -1.68
LONRF3Q496Y0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.58□□□□□ -1.68
LONRF3Q496Y0 AC138915.3-201ENST00000562908 1389 ntBASIC4.58□□□□□ -1.68
LONRF3Q496Y0 RNU6-343P-201ENST00000364709 104 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 500.9 ms