Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RNU6-56P-201ENST00000516986 93 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.73□□□□□ -1.97
RFX4Q33E94 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.73□□□□□ -1.97
RFX4Q33E94 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.73□□□□□ -1.97
RFX4Q33E94 CCNG2P1-201ENST00000549521 1000 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.73□□□□□ -1.97
RFX4Q33E94 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.73□□□□□ -1.97
RFX4Q33E94 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.73□□□□□ -1.97
RFX4Q33E94 AC012669.1-201ENST00000603209 283 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 MTND3P19-201ENST00000603825 345 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 AC024933.1-201ENST00000608472 348 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.73□□□□□ -1.97
RFX4Q33E94 AC005332.6-201ENST00000613178 446 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.73□□□□□ -1.97
RFX4Q33E94 AC092650.2-201ENST00000619984 902 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 AC007318.2-201ENST00000620999 243 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 OR1S1-201ENST00000624470 978 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 AP000676.4-201ENST00000624659 623 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 AC120349.2-201ENST00000625002 298 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 AC091925.2-201ENST00000625059 256 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.73□□□□□ -1.97
RFX4Q33E94 U6.101-201ENST00000637707 76 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
RFX4Q33E94 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.73□□□□□ -1.97
RFX4Q33E94 GDI2P1-201ENST00000429312 1336 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 AC107982.1-201ENST00000507171 1300 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 AL355596.1-201ENST00000565399 3996 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.72□□□□□ -1.97
RFX4Q33E94 Y_RNA.25-201ENST00000362528 102 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 RNU6-216P-201ENST00000363282 104 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.72□□□□□ -1.97
RFX4Q33E94 RNU6-925P-201ENST00000384629 104 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 MIR506-201ENST00000384998 124 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 U3.19-201ENST00000390893 196 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 U3.42-201ENST00000408746 214 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 RNU6-712P-201ENST00000410558 100 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.72□□□□□ -1.97
RFX4Q33E94 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.72□□□□□ -1.97
RFX4Q33E94 MRPS36P1-201ENST00000421291 307 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 HSFY1P1-201ENST00000423928 1178 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.72□□□□□ -1.97
RFX4Q33E94 AC005300.1-201ENST00000428401 373 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.72□□□□□ -1.97
RFX4Q33E94 RPL23AP76-201ENST00000441860 458 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.72□□□□□ -1.97
RFX4Q33E94 AC091153.1-201ENST00000466297 402 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RFX4Q33E94 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.72□□□□□ -1.97
RFX4Q33E94 AC111000.2-201ENST00000507775 550 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 AC010460.2-201ENST00000509054 677 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 AC113347.3-201ENST00000509113 148 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.72□□□□□ -1.97
RFX4Q33E94 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.72□□□□□ -1.97
RFX4Q33E94 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.72□□□□□ -1.97
RFX4Q33E94 FAM60DP-201ENST00000524174 632 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 OR10V3P-201ENST00000525712 725 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.72□□□□□ -1.97
RFX4Q33E94 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RFX4Q33E94 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.72□□□□□ -1.97
RFX4Q33E94 AC126177.3-201ENST00000551839 688 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.72□□□□□ -1.97
RFX4Q33E94 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.72□□□□□ -1.97
RFX4Q33E94 COX6CP3-201ENST00000580869 223 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 DPRXP5-201ENST00000604662 539 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 AC128687.1-201ENST00000605304 619 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.72□□□□□ -1.97
RFX4Q33E94 CYP3A51P-201ENST00000633513 256 ntBASIC2.72□□□□□ -1.97
RFX4Q33E94 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.72□□□□□ -1.97
RFX4Q33E94 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.72□□□□□ -1.97
RFX4Q33E94 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
RFX4Q33E94 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.72□□□□□ -1.97
RFX4Q33E94 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RFX4Q33E94 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.97
RFX4Q33E94 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
RFX4Q33E94 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.71□□□□□ -1.98
RFX4Q33E94 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RFX4Q33E94 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.71□□□□□ -1.98
RFX4Q33E94 CD24P4-201ENST00000382840 243 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 MIR512-1-201ENST00000384913 84 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 SNRPEP2-201ENST00000397592 279 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RFX4Q33E94 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.71□□□□□ -1.98
RFX4Q33E94 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.71□□□□□ -1.98
RFX4Q33E94 MTCO2P23-201ENST00000425216 680 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 AC079780.1-201ENST00000428259 207 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 AC109583.1-201ENST00000432156 268 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 RPL36AP6-201ENST00000435770 321 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.71□□□□□ -1.98
RFX4Q33E94 AC006028.1-201ENST00000438379 402 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.71□□□□□ -1.98
RFX4Q33E94 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.71□□□□□ -1.98
RFX4Q33E94 RPL23AP20-201ENST00000447965 421 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 TRGVB-201ENST00000453257 471 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 USP9YP34-201ENST00000453983 808 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.71□□□□□ -1.98
RFX4Q33E94 AC108734.3-201ENST00000481241 1165 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 RPL21P131-201ENST00000497298 483 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 UBE2V1P12-201ENST00000503954 474 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RFX4Q33E94 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms