Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.59□□□□□ -2.15
SSBP1Q04837 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.59□□□□□ -2.15
SSBP1Q04837 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.59□□□□□ -2.15
SSBP1Q04837 OR4V1P-201ENST00000525394 1140 ntBASIC1.59□□□□□ -2.15
SSBP1Q04837 AP002812.4-201ENST00000532139 286 ntBASIC1.59□□□□□ -2.15
SSBP1Q04837 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.59□□□□□ -2.15
SSBP1Q04837 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.59□□□□□ -2.15
SSBP1Q04837 AC005021.1-201ENST00000608730 355 ntBASIC1.59□□□□□ -2.15
SSBP1Q04837 AC009090.3-201ENST00000616553 565 ntBASIC1.59□□□□□ -2.15
SSBP1Q04837 AC020763.5-201ENST00000623298 430 ntBASIC1.59□□□□□ -2.15
SSBP1Q04837 AP003485.2-201ENST00000623636 610 ntBASIC1.59□□□□□ -2.15
SSBP1Q04837 AC095031.1-201ENST00000623685 672 ntBASIC1.59□□□□□ -2.15
SSBP1Q04837 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.59□□□□□ -2.15
SSBP1Q04837 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.59□□□□□ -2.15
SSBP1Q04837 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.59□□□□□ -2.15
SSBP1Q04837 AC092881.1-201ENST00000638218 2733 ntBASIC1.59□□□□□ -2.16
SSBP1Q04837 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
SSBP1Q04837 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.58□□□□□ -2.16
SSBP1Q04837 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
SSBP1Q04837 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SSBP1Q04837 SET-203ENST00000372688 801 ntTSL 2 BASIC1.58□□□□□ -2.16
SSBP1Q04837 AC096533.1-201ENST00000411645 353 ntBASIC1.58□□□□□ -2.16
SSBP1Q04837 VN1R51P-201ENST00000411675 945 ntBASIC1.58□□□□□ -2.16
SSBP1Q04837 AL357078.2-201ENST00000416486 427 ntBASIC1.58□□□□□ -2.16
SSBP1Q04837 SDCBPP1-201ENST00000440192 890 ntBASIC1.58□□□□□ -2.16
SSBP1Q04837 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.58□□□□□ -2.16
SSBP1Q04837 XKRY2-201ENST00000442362 1093 ntBASIC1.58□□□□□ -2.16
SSBP1Q04837 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.58□□□□□ -2.16
SSBP1Q04837 AC114982.2-201ENST00000461396 358 ntBASIC1.58□□□□□ -2.16
SSBP1Q04837 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SSBP1Q04837 MTAPP1-201ENST00000489154 819 ntBASIC1.58□□□□□ -2.16
SSBP1Q04837 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.58□□□□□ -2.16
SSBP1Q04837 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.58□□□□□ -2.16
SSBP1Q04837 AC067904.2-201ENST00000517322 1283 ntBASIC1.58□□□□□ -2.16
SSBP1Q04837 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SSBP1Q04837 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.58□□□□□ -2.16
SSBP1Q04837 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.58□□□□□ -2.16
SSBP1Q04837 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.58□□□□□ -2.16
SSBP1Q04837 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.58□□□□□ -2.16
SSBP1Q04837 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.58□□□□□ -2.16
SSBP1Q04837 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.58□□□□□ -2.16
SSBP1Q04837 AC103881.1-201ENST00000603476 538 ntBASIC1.58□□□□□ -2.16
SSBP1Q04837 AP004372.1-201ENST00000604842 844 ntBASIC1.58□□□□□ -2.16
SSBP1Q04837 AP004247.3-201ENST00000608682 624 ntBASIC1.58□□□□□ -2.16
SSBP1Q04837 AC245517.5-201ENST00000611529 162 ntBASIC1.58□□□□□ -2.16
SSBP1Q04837 Y_RNA.783-201ENST00000613546 102 ntBASIC1.58□□□□□ -2.16
SSBP1Q04837 U6.48-201ENST00000618523 106 ntBASIC1.58□□□□□ -2.16
SSBP1Q04837 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.58□□□□□ -2.16
SSBP1Q04837 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.58□□□□□ -2.16
SSBP1Q04837 MIR6873-201ENST00000622788 63 ntBASIC1.58□□□□□ -2.16
SSBP1Q04837 AC244517.12-201ENST00000623581 663 ntBASIC1.58□□□□□ -2.16
SSBP1Q04837 OR1S1-201ENST00000624470 978 ntBASIC1.58□□□□□ -2.16
SSBP1Q04837 MIR219B-201ENST00000637023 88 ntBASIC1.58□□□□□ -2.16
SSBP1Q04837 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SSBP1Q04837 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SSBP1Q04837 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
SSBP1Q04837 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SSBP1Q04837 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
SSBP1Q04837 HMGB1P5-201ENST00000255320 642 ntBASIC1.57□□□□□ -2.16
SSBP1Q04837 U3.12-201ENST00000364498 214 ntBASIC1.57□□□□□ -2.16
SSBP1Q04837 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SSBP1Q04837 RPS4XP8-201ENST00000402039 771 ntBASIC1.57□□□□□ -2.16
SSBP1Q04837 MIR1250-201ENST00000408098 113 ntBASIC1.57□□□□□ -2.16
SSBP1Q04837 BTF3P9-201ENST00000418784 283 ntBASIC1.57□□□□□ -2.16
SSBP1Q04837 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.57□□□□□ -2.16
SSBP1Q04837 UBE2FP3-201ENST00000436366 524 ntBASIC1.57□□□□□ -2.16
SSBP1Q04837 AC009237.8-201ENST00000445492 379 ntBASIC1.57□□□□□ -2.16
SSBP1Q04837 HMGB1P48-201ENST00000446155 598 ntBASIC1.57□□□□□ -2.16
SSBP1Q04837 HMGN1P5-201ENST00000448591 263 ntBASIC1.57□□□□□ -2.16
SSBP1Q04837 AC114322.1-201ENST00000506771 926 ntBASIC1.57□□□□□ -2.16
SSBP1Q04837 IGKV2D-36-201ENST00000518643 226 ntBASIC1.57□□□□□ -2.16
SSBP1Q04837 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.57□□□□□ -2.16
SSBP1Q04837 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SSBP1Q04837 ARL1-211ENST00000551828 776 ntTSL 5 BASIC1.57□□□□□ -2.16
SSBP1Q04837 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.57□□□□□ -2.16
SSBP1Q04837 HSPE1P3-201ENST00000559254 309 ntBASIC1.57□□□□□ -2.16
SSBP1Q04837 AC009063.1-201ENST00000563342 702 ntBASIC1.57□□□□□ -2.16
SSBP1Q04837 MIR4419B-201ENST00000577260 68 ntBASIC1.57□□□□□ -2.16
SSBP1Q04837 AL356280.1-201ENST00000603614 379 ntBASIC1.57□□□□□ -2.16
SSBP1Q04837 AL033523.1-201ENST00000605153 153 ntBASIC1.57□□□□□ -2.16
SSBP1Q04837 AC135178.6-201ENST00000605314 398 ntBASIC1.57□□□□□ -2.16
SSBP1Q04837 AC103710.1-201ENST00000610003 901 ntBASIC1.57□□□□□ -2.16
SSBP1Q04837 MIR6076-201ENST00000617521 113 ntBASIC1.57□□□□□ -2.16
SSBP1Q04837 AC012150.2-201ENST00000621300 544 ntBASIC1.57□□□□□ -2.16
SSBP1Q04837 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.57□□□□□ -2.16
SSBP1Q04837 AC006020.1-201ENST00000420179 1854 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SSBP1Q04837 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.56□□□□□ -2.16
SSBP1Q04837 FTLP6-201ENST00000355274 422 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 RNA5SP139-201ENST00000364340 117 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 SNORD48-201ENST00000364953 64 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
SSBP1Q04837 TAS2R15P-201ENST00000390674 928 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 AP002784.2-201ENST00000397300 549 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 AL024474.1-201ENST00000404655 591 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 AL355497.1-201ENST00000406262 551 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 MTATP6P31-201ENST00000406985 692 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 AC105402.1-201ENST00000413336 545 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 ZNF90P2-204ENST00000419323 1075 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms