Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SEC61A1P61619 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.59□□□□□ -1.84
SEC61A1P61619 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.59□□□□□ -1.84
SEC61A1P61619 PABPC1P7-201ENST00000413177 1513 ntBASIC3.59□□□□□ -1.84
SEC61A1P61619 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SEC61A1P61619 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.59□□□□□ -1.84
SEC61A1P61619 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SEC61A1P61619 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SEC61A1P61619 AC007390.2-201ENST00000606229 3803 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.58□□□□□ -1.84
SEC61A1P61619 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SEC61A1P61619 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SEC61A1P61619 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SEC61A1P61619 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SEC61A1P61619 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SEC61A1P61619 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SEC61A1P61619 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SEC61A1P61619 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SEC61A1P61619 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SEC61A1P61619 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SEC61A1P61619 AL356421.1-201ENST00000403255 413 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 CIR1P3-201ENST00000405137 479 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 MIR1277-201ENST00000408536 78 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 AC127391.1-201ENST00000411737 98 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 MTATP6P27-201ENST00000416987 621 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 MTCO2P5-201ENST00000422621 426 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.58□□□□□ -1.84
SEC61A1P61619 RPL23AP33-201ENST00000442301 452 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 AL590399.6-201ENST00000446396 307 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 C1DP4-201ENST00000455429 424 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 RPL7P15-201ENST00000461190 712 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 RPL35P6-201ENST00000490024 372 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.58□□□□□ -1.84
SEC61A1P61619 AC019235.1-201ENST00000503847 207 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.58□□□□□ -1.84
SEC61A1P61619 BTF3L4P4-201ENST00000506381 449 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 ARL4AP2-201ENST00000507378 601 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 MTCO1P35-201ENST00000515270 228 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SEC61A1P61619 RNU6-27P-201ENST00000516146 107 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 RNA5SP49-201ENST00000516450 115 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.58□□□□□ -1.84
SEC61A1P61619 AP001893.2-201ENST00000526949 202 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 OR5AQ1P-201ENST00000527596 927 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.58□□□□□ -1.84
SEC61A1P61619 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.58□□□□□ -1.84
SEC61A1P61619 AC006064.5-201ENST00000541782 248 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.58□□□□□ -1.84
SEC61A1P61619 AL109766.1-201ENST00000555080 552 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 AL121579.1-201ENST00000555129 305 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.58□□□□□ -1.84
SEC61A1P61619 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.58□□□□□ -1.84
SEC61A1P61619 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.58□□□□□ -1.84
SEC61A1P61619 DUXAP4-201ENST00000603046 613 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 LARP7P1-201ENST00000605576 316 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 AC011816.2-201ENST00000607089 556 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 RNU6-87P-201ENST00000607561 108 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 AL161734.1-201ENST00000609720 557 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 AL590282.1-201ENST00000610379 1136 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 AL133173.2-201ENST00000614270 90 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.58□□□□□ -1.84
SEC61A1P61619 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SEC61A1P61619 AC010149.2-201ENST00000637608 315 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 AC024560.2-201ENST00000507981 1497 ntBASIC3.58□□□□□ -1.84
SEC61A1P61619 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
SEC61A1P61619 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.58□□□□□ -1.84
SEC61A1P61619 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.58□□□□□ -1.84
SEC61A1P61619 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SEC61A1P61619 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.58□□□□□ -1.84
SEC61A1P61619 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.57□□□□□ -1.84
SEC61A1P61619 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SEC61A1P61619 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SEC61A1P61619 Y_RNA.1-201ENST00000352915 104 ntBASIC3.57□□□□□ -1.84
SEC61A1P61619 RNU6-282P-201ENST00000365357 103 ntBASIC3.57□□□□□ -1.84
SEC61A1P61619 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SEC61A1P61619 SNORA70C-201ENST00000384538 135 ntBASIC3.57□□□□□ -1.84
SEC61A1P61619 MT-TC-201ENST00000387405 66 ntBASIC3.57□□□□□ -1.84
SEC61A1P61619 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SEC61A1P61619 RN7SKP235-201ENST00000410662 305 ntBASIC3.57□□□□□ -1.84
SEC61A1P61619 RNU4-78P-201ENST00000410940 126 ntBASIC3.57□□□□□ -1.84
SEC61A1P61619 AL359704.1-201ENST00000411586 781 ntBASIC3.57□□□□□ -1.84
SEC61A1P61619 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SEC61A1P61619 AC019097.1-201ENST00000424783 735 ntBASIC3.57□□□□□ -1.84
SEC61A1P61619 AL157831.1-201ENST00000426134 473 ntBASIC3.57□□□□□ -1.84
SEC61A1P61619 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.57□□□□□ -1.84
SEC61A1P61619 AC000111.3-201ENST00000433478 193 ntBASIC3.57□□□□□ -1.84
SEC61A1P61619 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.57□□□□□ -1.84
SEC61A1P61619 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.57□□□□□ -1.84
SEC61A1P61619 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SEC61A1P61619 RPL29P29-201ENST00000448725 423 ntBASIC3.57□□□□□ -1.84
SEC61A1P61619 HMGB1P15-201ENST00000453854 435 ntBASIC3.57□□□□□ -1.84
SEC61A1P61619 RPL7P19-201ENST00000469948 618 ntBASIC3.57□□□□□ -1.84
SEC61A1P61619 AC087312.1-201ENST00000471411 480 ntBASIC3.57□□□□□ -1.84
SEC61A1P61619 KCTD9P5-201ENST00000504141 1170 ntBASIC3.57□□□□□ -1.84
SEC61A1P61619 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.57□□□□□ -1.84
SEC61A1P61619 LARP1BP1-201ENST00000506036 1359 ntBASIC3.57□□□□□ -1.84
SEC61A1P61619 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.57□□□□□ -1.84
SEC61A1P61619 SAP18P1-201ENST00000512058 390 ntBASIC3.57□□□□□ -1.84
SEC61A1P61619 AC074344.1-201ENST00000512823 224 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms