Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.32□□□□□ -1.88
PEX3P56589 USP9YP34-201ENST00000453983 808 ntBASIC3.32□□□□□ -1.88
PEX3P56589 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.32□□□□□ -1.88
PEX3P56589 OR4G11P-201ENST00000492842 939 ntBASIC3.32□□□□□ -1.88
PEX3P56589 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.32□□□□□ -1.88
PEX3P56589 AC114967.1-201ENST00000504890 259 ntBASIC3.32□□□□□ -1.88
PEX3P56589 POU5F1P7-201ENST00000508759 541 ntBASIC3.32□□□□□ -1.88
PEX3P56589 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.32□□□□□ -1.88
PEX3P56589 AC105185.1-201ENST00000518705 535 ntBASIC3.32□□□□□ -1.88
PEX3P56589 AC068657.1-201ENST00000520807 306 ntBASIC3.32□□□□□ -1.88
PEX3P56589 TRAV37-201ENST00000553906 342 ntBASIC3.32□□□□□ -1.88
PEX3P56589 AC009094.1-201ENST00000564443 426 ntBASIC3.32□□□□□ -1.88
PEX3P56589 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.32□□□□□ -1.88
PEX3P56589 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.32□□□□□ -1.88
PEX3P56589 AC025588.3-201ENST00000604182 274 ntBASIC3.32□□□□□ -1.88
PEX3P56589 AL513477.2-201ENST00000607858 568 ntBASIC3.32□□□□□ -1.88
PEX3P56589 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.32□□□□□ -1.88
PEX3P56589 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.32□□□□□ -1.88
PEX3P56589 AC087683.2-201ENST00000611384 326 ntBASIC3.32□□□□□ -1.88
PEX3P56589 AP000770.2-201ENST00000623694 100 ntBASIC3.32□□□□□ -1.88
PEX3P56589 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.32□□□□□ -1.88
PEX3P56589 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PEX3P56589 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.31□□□□□ -1.88
PEX3P56589 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PEX3P56589 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PEX3P56589 RPL23AP57-201ENST00000332361 466 ntBASIC3.31□□□□□ -1.88
PEX3P56589 MIR148B-201ENST00000362252 99 ntBASIC3.31□□□□□ -1.88
PEX3P56589 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.31□□□□□ -1.88
PEX3P56589 U3.29-201ENST00000391296 212 ntBASIC3.31□□□□□ -1.88
PEX3P56589 SNORA48.8-201ENST00000391324 134 ntBASIC3.31□□□□□ -1.88
PEX3P56589 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PEX3P56589 MTND4LP20-201ENST00000402379 270 ntBASIC3.31□□□□□ -1.88
PEX3P56589 HSPE1P26-201ENST00000405341 275 ntBASIC3.31□□□□□ -1.88
PEX3P56589 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.31□□□□□ -1.88
PEX3P56589 RNU6-757P-201ENST00000410334 100 ntBASIC3.31□□□□□ -1.88
PEX3P56589 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.31□□□□□ -1.88
PEX3P56589 TIMM9P2-201ENST00000419324 266 ntBASIC3.31□□□□□ -1.88
PEX3P56589 RPL35AP12-201ENST00000425362 338 ntBASIC3.31□□□□□ -1.88
PEX3P56589 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.31□□□□□ -1.88
PEX3P56589 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.31□□□□□ -1.88
PEX3P56589 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PEX3P56589 AL591719.1-201ENST00000444669 744 ntBASIC3.31□□□□□ -1.88
PEX3P56589 HMGN2P21-201ENST00000447764 270 ntBASIC3.31□□□□□ -1.88
PEX3P56589 RSL24D1P3-201ENST00000449255 495 ntBASIC3.31□□□□□ -1.88
PEX3P56589 AL445669.2-201ENST00000454425 421 ntBASIC3.31□□□□□ -1.88
PEX3P56589 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.31□□□□□ -1.88
PEX3P56589 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.31□□□□□ -1.88
PEX3P56589 S100A11P2-201ENST00000467589 312 ntBASIC3.31□□□□□ -1.88
PEX3P56589 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.31□□□□□ -1.88
PEX3P56589 RPL7P18-201ENST00000478965 734 ntBASIC3.31□□□□□ -1.88
PEX3P56589 MTCYBP17-201ENST00000503579 789 ntBASIC3.31□□□□□ -1.88
PEX3P56589 AC118282.1-201ENST00000506408 765 ntBASIC3.31□□□□□ -1.88
PEX3P56589 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.31□□□□□ -1.88
PEX3P56589 RNU6-583P-201ENST00000516012 92 ntBASIC3.31□□□□□ -1.88
PEX3P56589 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PEX3P56589 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PEX3P56589 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PEX3P56589 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.31□□□□□ -1.88
PEX3P56589 OR4T1P-201ENST00000554933 911 ntBASIC3.31□□□□□ -1.88
PEX3P56589 HSPE1P3-201ENST00000559254 309 ntBASIC3.31□□□□□ -1.88
PEX3P56589 MIR4637-201ENST00000582405 84 ntBASIC3.31□□□□□ -1.88
PEX3P56589 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.31□□□□□ -1.88
PEX3P56589 VN1R78P-201ENST00000597393 564 ntBASIC3.31□□□□□ -1.88
PEX3P56589 AL592221.1-201ENST00000605266 382 ntBASIC3.31□□□□□ -1.88
PEX3P56589 AC005000.2-201ENST00000605468 310 ntBASIC3.31□□□□□ -1.88
PEX3P56589 AC121761.2-201ENST00000617300 689 ntBASIC3.31□□□□□ -1.88
PEX3P56589 AL355493.4-201ENST00000618530 292 ntBASIC3.31□□□□□ -1.88
PEX3P56589 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.31□□□□□ -1.88
PEX3P56589 AC048347.1-201ENST00000624621 427 ntBASIC3.31□□□□□ -1.88
PEX3P56589 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.31□□□□□ -1.88
PEX3P56589 U6.101-201ENST00000637707 76 ntBASIC3.31□□□□□ -1.88
PEX3P56589 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PEX3P56589 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PEX3P56589 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.31□□□□□ -1.88
PEX3P56589 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.3□□□□□ -1.88
PEX3P56589 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PEX3P56589 AL390862.1-201ENST00000635467 1469 ntBASIC3.3□□□□□ -1.88
PEX3P56589 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PEX3P56589 GNG5P1-201ENST00000255500 204 ntBASIC3.3□□□□□ -1.88
PEX3P56589 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PEX3P56589 RNU6-989P-201ENST00000362756 107 ntBASIC3.3□□□□□ -1.88
PEX3P56589 RNU6-1214P-201ENST00000363650 109 ntBASIC3.3□□□□□ -1.88
PEX3P56589 SNORA46-201ENST00000384762 135 ntBASIC3.3□□□□□ -1.88
PEX3P56589 HMGB1P17-201ENST00000403495 628 ntBASIC3.3□□□□□ -1.88
PEX3P56589 AL583834.1-201ENST00000406943 343 ntBASIC3.3□□□□□ -1.88
PEX3P56589 RNA5SP274-201ENST00000410484 108 ntBASIC3.3□□□□□ -1.88
PEX3P56589 HMGB3P23-201ENST00000414981 585 ntBASIC3.3□□□□□ -1.88
PEX3P56589 AC245054.2-201ENST00000415639 319 ntBASIC3.3□□□□□ -1.88
PEX3P56589 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.3□□□□□ -1.88
PEX3P56589 AC092447.3-201ENST00000426027 686 ntBASIC3.3□□□□□ -1.88
PEX3P56589 TRIAP1P1-201ENST00000427062 225 ntBASIC3.3□□□□□ -1.88
PEX3P56589 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.3□□□□□ -1.88
PEX3P56589 NEK4P1-201ENST00000433383 879 ntBASIC3.3□□□□□ -1.88
PEX3P56589 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.3□□□□□ -1.88
PEX3P56589 AC092427.1-201ENST00000439177 601 ntBASIC3.3□□□□□ -1.88
PEX3P56589 MTND3P1-201ENST00000441336 220 ntBASIC3.3□□□□□ -1.88
PEX3P56589 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.3□□□□□ -1.88
PEX3P56589 AC026410.2-201ENST00000460281 156 ntBASIC3.3□□□□□ -1.88
PEX3P56589 MTND1P16-201ENST00000465177 898 ntBASIC3.3□□□□□ -1.88
PEX3P56589 RPL7P5-201ENST00000471472 736 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms