Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC104563.1-201ENST00000476147 376 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.93□□□□□ -1.78
HDAC4P56524 AL139099.1-201ENST00000497398 403 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 RPL23AP55-201ENST00000498163 452 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 MTCO3P7-201ENST00000510008 774 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 RNU6-27P-201ENST00000516146 107 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 RNA5SP164-201ENST00000516533 110 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.93□□□□□ -1.78
HDAC4P56524 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.93□□□□□ -1.78
HDAC4P56524 OR5AP1P-201ENST00000529730 940 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.93□□□□□ -1.78
HDAC4P56524 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
HDAC4P56524 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
HDAC4P56524 PCMTD1P2-201ENST00000565017 355 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 AC091489.2-201ENST00000566263 604 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.93□□□□□ -1.78
HDAC4P56524 AC012065.4-201ENST00000602445 679 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HDAC4P56524 AC128687.1-201ENST00000605304 619 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HDAC4P56524 AC025594.3-201ENST00000613068 790 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 MIR8058-201ENST00000615737 89 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HDAC4P56524 AC090582.1-201ENST00000636321 199 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 AP001350.1-201ENST00000601906 1524 ntBASIC3.93□□□□□ -1.78
HDAC4P56524 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
HDAC4P56524 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HDAC4P56524 AL021368.2-201ENST00000606125 5352 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 RNU1-18P-201ENST00000363062 164 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 Y_RNA.194-201ENST00000363985 102 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 RNA5SP235-201ENST00000365411 114 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HDAC4P56524 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.92□□□□□ -1.78
HDAC4P56524 RNU2-37P-201ENST00000410695 177 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.92□□□□□ -1.78
HDAC4P56524 MTCO3P12-201ENST00000416718 547 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 TOMM22P1-201ENST00000418578 312 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.92□□□□□ -1.78
HDAC4P56524 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.92□□□□□ -1.78
HDAC4P56524 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.92□□□□□ -1.78
HDAC4P56524 AC007742.1-201ENST00000425789 329 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.92□□□□□ -1.78
HDAC4P56524 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.92□□□□□ -1.78
HDAC4P56524 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.92□□□□□ -1.78
HDAC4P56524 ELOCP26-201ENST00000436067 329 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 COX6CP2-201ENST00000444980 225 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 PRSS3P4-201ENST00000453323 162 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 HMGB1P15-201ENST00000453854 435 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 MTCO3P20-201ENST00000454926 688 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 RPL23AP14-201ENST00000468281 468 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 AC116337.2-201ENST00000477662 156 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HDAC4P56524 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.92□□□□□ -1.78
HDAC4P56524 POU5F1P7-201ENST00000508759 541 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.92□□□□□ -1.78
HDAC4P56524 AC021146.1-201ENST00000511202 716 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.92□□□□□ -1.78
HDAC4P56524 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.92□□□□□ -1.78
HDAC4P56524 RNU6-1073P-201ENST00000517182 106 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.92□□□□□ -1.78
HDAC4P56524 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.92□□□□□ -1.78
HDAC4P56524 OR4P1P-201ENST00000530808 1136 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.92□□□□□ -1.78
HDAC4P56524 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.92□□□□□ -1.78
HDAC4P56524 HSPE1P5-201ENST00000561489 272 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.92□□□□□ -1.78
HDAC4P56524 ZNF192P1-203ENST00000565888 810 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 AC012182.1-201ENST00000570133 895 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.92□□□□□ -1.78
HDAC4P56524 MIR544B-201ENST00000582372 78 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.92□□□□□ -1.78
HDAC4P56524 MIR548AB-201ENST00000584917 84 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.92□□□□□ -1.78
HDAC4P56524 AC022146.1-201ENST00000595307 847 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 BNIP3P23-201ENST00000599655 511 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 AL451086.1-201ENST00000605596 223 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HDAC4P56524 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.92□□□□□ -1.78
HDAC4P56524 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HDAC4P56524 AC009878.1-201ENST00000621819 340 ntBASIC3.92□□□□□ -1.78
HDAC4P56524 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.92□□□□□ -1.78
HDAC4P56524 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.92□□□□□ -1.78
HDAC4P56524 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
HDAC4P56524 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
HDAC4P56524 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HDAC4P56524 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.92□□□□□ -1.78
HDAC4P56524 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
HDAC4P56524 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.91□□□□□ -1.78
HDAC4P56524 AC005183.1-201ENST00000603687 1979 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
HDAC4P56524 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
HDAC4P56524 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
HDAC4P56524 RNU6-629P-201ENST00000384061 103 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 MIR449B-201ENST00000384995 97 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 MIR483-201ENST00000385070 76 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.91□□□□□ -1.78
HDAC4P56524 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.91□□□□□ -1.78
HDAC4P56524 AL139247.1-201ENST00000422768 325 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms