Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 HMGB1P27-201ENST00000431429 603 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.56□□□□□ -1.68
GFRA1P56159 RPS3AP52-201ENST00000435639 297 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 RPL23AP89-201ENST00000439324 255 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.56□□□□□ -1.68
GFRA1P56159 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.56□□□□□ -1.68
GFRA1P56159 H2AFZP5-201ENST00000446960 382 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 RPL7P43-201ENST00000478876 753 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 RN7SL441P-201ENST00000492388 296 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 AP001086.1-201ENST00000494882 321 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
GFRA1P56159 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.56□□□□□ -1.68
GFRA1P56159 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.56□□□□□ -1.68
GFRA1P56159 RN7SKP24-201ENST00000515888 284 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 SNORA31.22-201ENST00000517204 135 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.56□□□□□ -1.68
GFRA1P56159 OR5D15P-201ENST00000531671 942 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 AC020661.2-201ENST00000560114 134 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 AC007151.1-201ENST00000572774 483 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 MIR3941-201ENST00000582572 103 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.56□□□□□ -1.68
GFRA1P56159 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.56□□□□□ -1.68
GFRA1P56159 BDH2P1-201ENST00000602288 736 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.56□□□□□ -1.68
GFRA1P56159 ATP1B3P1-201ENST00000605365 821 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 AC080078.3-201ENST00000605407 463 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 DUSP12P1-201ENST00000612874 516 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 AL359757.2-201ENST00000624309 274 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.56□□□□□ -1.68
GFRA1P56159 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.56□□□□□ -1.68
GFRA1P56159 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GFRA1P56159 AC104118.1-201ENST00000607625 1589 ntBASIC4.56□□□□□ -1.68
GFRA1P56159 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
GFRA1P56159 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.56□□□□□ -1.68
GFRA1P56159 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
GFRA1P56159 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.56□□□□□ -1.68
GFRA1P56159 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.55□□□□□ -1.68
GFRA1P56159 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GFRA1P56159 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GFRA1P56159 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GFRA1P56159 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GFRA1P56159 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GFRA1P56159 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.55□□□□□ -1.68
GFRA1P56159 MUC2-202ENST00000613187 4845 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.55□□□□□ -1.68
GFRA1P56159 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GFRA1P56159 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
GFRA1P56159 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.55□□□□□ -1.68
GFRA1P56159 RN7SKP95-201ENST00000362860 303 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 Y_RNA.212-201ENST00000364177 102 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 SNORA4.3-201ENST00000365564 137 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.55□□□□□ -1.68
GFRA1P56159 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
GFRA1P56159 RNU4-14P-201ENST00000410858 122 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 RNU6-370P-201ENST00000411008 104 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 AC080125.1-201ENST00000414888 684 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 AC092809.3-201ENST00000415453 231 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.55□□□□□ -1.68
GFRA1P56159 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.55□□□□□ -1.68
GFRA1P56159 FAR2P4-202ENST00000425399 584 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.55□□□□□ -1.68
GFRA1P56159 PRPF38AP2-201ENST00000438179 851 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.55□□□□□ -1.68
GFRA1P56159 RPS29P9-201ENST00000440360 171 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.55□□□□□ -1.68
GFRA1P56159 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.55□□□□□ -1.68
GFRA1P56159 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.55□□□□□ -1.68
GFRA1P56159 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.55□□□□□ -1.68
GFRA1P56159 RNU7-167P-201ENST00000459160 62 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.55□□□□□ -1.68
GFRA1P56159 AC106872.2-201ENST00000494303 480 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 AP002812.1-201ENST00000495378 474 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 AC140172.1-201ENST00000502928 141 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
GFRA1P56159 AC008033.2-201ENST00000542626 177 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 AC090115.3-201ENST00000553218 849 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.55□□□□□ -1.68
GFRA1P56159 AC138761.3-201ENST00000579993 334 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 MIR3672-201ENST00000584290 82 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 AC023043.2-201ENST00000589678 1026 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.55□□□□□ -1.68
GFRA1P56159 DPPA3P3-201ENST00000603842 430 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 AC024940.4-201ENST00000605507 246 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.55□□□□□ -1.68
GFRA1P56159 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.55□□□□□ -1.68
GFRA1P56159 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
GFRA1P56159 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.55□□□□□ -1.68
GFRA1P56159 AC015967.1-201ENST00000619893 476 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 MTND5P42-201ENST00000637720 498 ntBASIC4.55□□□□□ -1.68
GFRA1P56159 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
GFRA1P56159 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GFRA1P56159 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
GFRA1P56159 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
GFRA1P56159 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GFRA1P56159 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
GFRA1P56159 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
GFRA1P56159 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.55□□□□□ -1.68
GFRA1P56159 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GFRA1P56159 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.55□□□□□ -1.68
GFRA1P56159 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms