Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 UQCRHP3-201ENST00000451503 251 ntBASIC2.91□□□□□ -1.94
LIM2P55344 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.91□□□□□ -1.94
LIM2P55344 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.91□□□□□ -1.94
LIM2P55344 RPL23AP62-201ENST00000463396 453 ntBASIC2.91□□□□□ -1.94
LIM2P55344 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.91□□□□□ -1.94
LIM2P55344 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.91□□□□□ -1.94
LIM2P55344 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.91□□□□□ -1.94
LIM2P55344 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.91□□□□□ -1.94
LIM2P55344 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.91□□□□□ -1.94
LIM2P55344 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.91□□□□□ -1.94
LIM2P55344 RNA5SP216-201ENST00000516111 123 ntBASIC2.91□□□□□ -1.94
LIM2P55344 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.91□□□□□ -1.94
LIM2P55344 OR5AK1P-201ENST00000524837 922 ntBASIC2.91□□□□□ -1.94
LIM2P55344 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
LIM2P55344 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.91□□□□□ -1.94
LIM2P55344 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.91□□□□□ -1.94
LIM2P55344 AC010198.2-201ENST00000550612 259 ntBASIC2.91□□□□□ -1.94
LIM2P55344 SYF2P1-201ENST00000550658 413 ntBASIC2.91□□□□□ -1.94
LIM2P55344 AC126177.3-201ENST00000551839 688 ntBASIC2.91□□□□□ -1.94
LIM2P55344 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.91□□□□□ -1.94
LIM2P55344 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.91□□□□□ -1.94
LIM2P55344 MIR5195-201ENST00000583555 115 ntBASIC2.91□□□□□ -1.94
LIM2P55344 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.91□□□□□ -1.94
LIM2P55344 AC012493.2-201ENST00000595083 291 ntBASIC2.91□□□□□ -1.94
LIM2P55344 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.91□□□□□ -1.94
LIM2P55344 AC105148.1-201ENST00000604961 409 ntBASIC2.91□□□□□ -1.94
LIM2P55344 AL592221.1-201ENST00000605266 382 ntBASIC2.91□□□□□ -1.94
LIM2P55344 AC245297.2-201ENST00000610119 565 ntBASIC2.91□□□□□ -1.94
LIM2P55344 AL442067.2-201ENST00000614033 363 ntBASIC2.91□□□□□ -1.94
LIM2P55344 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
LIM2P55344 AC006386.1-201ENST00000619436 415 ntBASIC2.91□□□□□ -1.94
LIM2P55344 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.91□□□□□ -1.94
LIM2P55344 AL445264.1-201ENST00000621719 171 ntBASIC2.91□□□□□ -1.94
LIM2P55344 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.91□□□□□ -1.94
LIM2P55344 AL353748.2-201ENST00000622148 471 ntBASIC2.91□□□□□ -1.94
LIM2P55344 AL078595.3-201ENST00000623815 1166 ntBASIC2.91□□□□□ -1.94
LIM2P55344 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.91□□□□□ -1.94
LIM2P55344 AP000776.1-201ENST00000530032 1663 ntBASIC2.91□□□□□ -1.94
LIM2P55344 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
LIM2P55344 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
LIM2P55344 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
LIM2P55344 MTND5P27-201ENST00000428871 1720 ntBASIC2.9□□□□□ -1.94
LIM2P55344 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.9□□□□□ -1.95
LIM2P55344 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
LIM2P55344 RNU6-50P-201ENST00000362356 103 ntBASIC2.9□□□□□ -1.95
LIM2P55344 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.9□□□□□ -1.95
LIM2P55344 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.9□□□□□ -1.95
LIM2P55344 RNU4-65P-201ENST00000410473 140 ntBASIC2.9□□□□□ -1.95
LIM2P55344 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.9□□□□□ -1.95
LIM2P55344 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.9□□□□□ -1.95
LIM2P55344 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.9□□□□□ -1.95
LIM2P55344 AC092447.6-201ENST00000414578 210 ntBASIC2.9□□□□□ -1.95
LIM2P55344 MTCYBP38-201ENST00000417160 1123 ntBASIC2.9□□□□□ -1.95
LIM2P55344 AL953862.1-201ENST00000423016 168 ntBASIC2.9□□□□□ -1.95
LIM2P55344 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.9□□□□□ -1.95
LIM2P55344 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.9□□□□□ -1.95
LIM2P55344 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.9□□□□□ -1.95
LIM2P55344 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.9□□□□□ -1.95
LIM2P55344 COX7BP2-201ENST00000437976 242 ntBASIC2.9□□□□□ -1.95
LIM2P55344 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.9□□□□□ -1.95
LIM2P55344 PTENP1-201ENST00000447117 1215 ntBASIC2.9□□□□□ -1.95
LIM2P55344 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.9□□□□□ -1.95
LIM2P55344 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.9□□□□□ -1.95
LIM2P55344 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.9□□□□□ -1.95
LIM2P55344 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.9□□□□□ -1.95
LIM2P55344 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.9□□□□□ -1.95
LIM2P55344 MTCYBP17-201ENST00000503579 789 ntBASIC2.9□□□□□ -1.95
LIM2P55344 AC010587.2-201ENST00000511727 448 ntBASIC2.9□□□□□ -1.95
LIM2P55344 AC105914.1-201ENST00000511798 226 ntBASIC2.9□□□□□ -1.95
LIM2P55344 CYCSP2-201ENST00000558168 301 ntBASIC2.9□□□□□ -1.95
LIM2P55344 AC087465.1-201ENST00000560574 245 ntBASIC2.9□□□□□ -1.95
LIM2P55344 AL845331.3-202ENST00000562856 261 ntBASIC2.9□□□□□ -1.95
LIM2P55344 AC074050.1-201ENST00000563247 211 ntBASIC2.9□□□□□ -1.95
LIM2P55344 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.9□□□□□ -1.95
LIM2P55344 AC090615.1-201ENST00000577519 154 ntBASIC2.9□□□□□ -1.95
LIM2P55344 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.9□□□□□ -1.95
LIM2P55344 AC012669.1-201ENST00000603209 283 ntBASIC2.9□□□□□ -1.95
LIM2P55344 AC007349.4-201ENST00000608114 532 ntBASIC2.9□□□□□ -1.95
LIM2P55344 AC009974.1-201ENST00000608881 455 ntBASIC2.9□□□□□ -1.95
LIM2P55344 AC107294.3-201ENST00000609211 526 ntBASIC2.9□□□□□ -1.95
LIM2P55344 AC131235.4-201ENST00000609288 620 ntBASIC2.9□□□□□ -1.95
LIM2P55344 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.9□□□□□ -1.95
LIM2P55344 AP000240.1-201ENST00000609910 452 ntBASIC2.9□□□□□ -1.95
LIM2P55344 MIR8057-201ENST00000620957 69 ntBASIC2.9□□□□□ -1.95
LIM2P55344 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.9□□□□□ -1.95
LIM2P55344 CRYM-AS1-204ENST00000637983 556 ntBASIC2.9□□□□□ -1.95
LIM2P55344 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
LIM2P55344 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.9□□□□□ -1.95
LIM2P55344 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
LIM2P55344 ZNF542P-204ENST00000482727 1305 ntBASIC2.9□□□□□ -1.95
LIM2P55344 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
LIM2P55344 ZNF826P-207ENST00000622273 1910 ntBASIC2.89□□□□□ -1.95
LIM2P55344 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.89□□□□□ -1.95
LIM2P55344 RNU6-1074P-201ENST00000383995 104 ntBASIC2.89□□□□□ -1.95
LIM2P55344 RPL23AP29-201ENST00000397284 453 ntBASIC2.89□□□□□ -1.95
LIM2P55344 AL031679.1-201ENST00000400616 525 ntBASIC2.89□□□□□ -1.95
LIM2P55344 DHFRP6-201ENST00000401776 268 ntBASIC2.89□□□□□ -1.95
LIM2P55344 RPL21P32-201ENST00000419877 477 ntBASIC2.89□□□□□ -1.95
LIM2P55344 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.89□□□□□ -1.95
LIM2P55344 SDCBPP1-201ENST00000440192 890 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms