Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NR1H2P55055 AL356867.1-201ENST00000429623 299 ntBASIC3.86□□□□□ -1.79
NR1H2P55055 AL353706.1-201ENST00000436728 494 ntBASIC3.86□□□□□ -1.79
NR1H2P55055 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.86□□□□□ -1.79
NR1H2P55055 GDI2P2-201ENST00000445131 608 ntBASIC3.86□□□□□ -1.79
NR1H2P55055 AC114755.5-201ENST00000447760 831 ntBASIC3.86□□□□□ -1.79
NR1H2P55055 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.86□□□□□ -1.79
NR1H2P55055 TPTE2P5-203ENST00000458118 728 ntBASIC3.86□□□□□ -1.79
NR1H2P55055 SNORA84-201ENST00000459229 133 ntBASIC3.86□□□□□ -1.79
NR1H2P55055 RPS23P3-201ENST00000470993 430 ntBASIC3.86□□□□□ -1.79
NR1H2P55055 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.86□□□□□ -1.79
NR1H2P55055 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.86□□□□□ -1.79
NR1H2P55055 AC068305.1-201ENST00000497406 726 ntBASIC3.86□□□□□ -1.79
NR1H2P55055 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.86□□□□□ -1.79
NR1H2P55055 RNU6-1003P-201ENST00000517099 105 ntBASIC3.86□□□□□ -1.79
NR1H2P55055 AP000873.5-201ENST00000533906 236 ntBASIC3.86□□□□□ -1.79
NR1H2P55055 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.86□□□□□ -1.79
NR1H2P55055 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.86□□□□□ -1.79
NR1H2P55055 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.86□□□□□ -1.79
NR1H2P55055 AC034105.4-201ENST00000568304 277 ntBASIC3.86□□□□□ -1.79
NR1H2P55055 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.86□□□□□ -1.79
NR1H2P55055 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.86□□□□□ -1.79
NR1H2P55055 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.86□□□□□ -1.79
NR1H2P55055 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.86□□□□□ -1.79
NR1H2P55055 AL391261.4-201ENST00000616012 481 ntBASIC3.86□□□□□ -1.79
NR1H2P55055 AL603758.1-201ENST00000618654 241 ntBASIC3.86□□□□□ -1.79
NR1H2P55055 MIR6891-201ENST00000618788 93 ntBASIC3.86□□□□□ -1.79
NR1H2P55055 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
NR1H2P55055 AC019226.1-201ENST00000625666 515 ntBASIC3.86□□□□□ -1.79
NR1H2P55055 AC140479.6-201ENST00000633535 357 ntBASIC3.86□□□□□ -1.79
NR1H2P55055 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.86□□□□□ -1.79
NR1H2P55055 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NR1H2P55055 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NR1H2P55055 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.86□□□□□ -1.79
NR1H2P55055 AC138915.3-201ENST00000562908 1389 ntBASIC3.86□□□□□ -1.79
NR1H2P55055 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NR1H2P55055 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NR1H2P55055 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
NR1H2P55055 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.85□□□□□ -1.79
NR1H2P55055 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NR1H2P55055 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NR1H2P55055 OTUD4P1-201ENST00000237841 3067 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.85□□□□□ -1.79
NR1H2P55055 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NR1H2P55055 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NR1H2P55055 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NR1H2P55055 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
NR1H2P55055 Y_RNA.548-201ENST00000384656 105 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 MIR1179-201ENST00000408703 91 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 RN7SKP53-201ENST00000411337 315 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NR1H2P55055 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.85□□□□□ -1.79
NR1H2P55055 MTCO2P34-201ENST00000421994 607 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 PPP1R11P2-201ENST00000423543 382 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 AL589823.1-201ENST00000429577 183 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 OR4C10P-201ENST00000434991 931 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.85□□□□□ -1.79
NR1H2P55055 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.85□□□□□ -1.79
NR1H2P55055 ST13P20-201ENST00000447996 1065 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 RPS11P1-201ENST00000451072 473 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 SNRPFP4-201ENST00000456366 242 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.85□□□□□ -1.79
NR1H2P55055 RNA5SP269-201ENST00000459032 137 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 RPL7P19-201ENST00000469948 618 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NR1H2P55055 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.85□□□□□ -1.79
NR1H2P55055 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.85□□□□□ -1.79
NR1H2P55055 MTND4LP18-201ENST00000526864 291 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.85□□□□□ -1.79
NR1H2P55055 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.85□□□□□ -1.79
NR1H2P55055 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.85□□□□□ -1.79
NR1H2P55055 AC125611.2-201ENST00000551907 647 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.85□□□□□ -1.79
NR1H2P55055 AC105224.1-201ENST00000587055 421 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 BNIP3P22-201ENST00000593399 556 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 AC004067.1-201ENST00000608733 700 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.85□□□□□ -1.79
NR1H2P55055 AL110115.1-201ENST00000614396 364 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NR1H2P55055 MIR3653-201ENST00000625572 110 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.85□□□□□ -1.79
NR1H2P55055 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NR1H2P55055 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.85□□□□□ -1.79
NR1H2P55055 AL136164.4-201ENST00000625013 2135 ntBASIC3.85□□□□□ -1.79
NR1H2P55055 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
NR1H2P55055 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
NR1H2P55055 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.84□□□□□ -1.79
NR1H2P55055 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NR1H2P55055 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.84□□□□□ -1.79
NR1H2P55055 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.84□□□□□ -1.79
NR1H2P55055 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
NR1H2P55055 RNU5A-1-201ENST00000362698 116 ntBASIC3.84□□□□□ -1.79
NR1H2P55055 RNU6-623P-201ENST00000363143 105 ntBASIC3.84□□□□□ -1.79
NR1H2P55055 Y_RNA.194-201ENST00000363985 102 ntBASIC3.84□□□□□ -1.79
NR1H2P55055 RNU5E-5P-201ENST00000365379 116 ntBASIC3.84□□□□□ -1.79
NR1H2P55055 RNU6-809P-201ENST00000384461 107 ntBASIC3.84□□□□□ -1.79
NR1H2P55055 PPIAP31-201ENST00000405422 495 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms