Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 DUXAP10-204ENST00000612052 616 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 AC104763.3-201ENST00000613765 618 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 AL138880.2-201ENST00000616214 239 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 AC026422.1-201ENST00000623961 452 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 AL137790.1-201ENST00000634283 177 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATXN3P54252 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATXN3P54252 MAPK10-322ENST00000641485 4530 ntBASIC3.31□□□□□ -1.88
ATXN3P54252 OR5BR1P-201ENST00000524992 1330 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 AC109315.1-201ENST00000584143 1347 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATXN3P54252 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATXN3P54252 FRG1BP-201ENST00000278882 761 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 SNORD56.3-201ENST00000363507 71 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 SNORA80A-201ENST00000363922 136 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 MIR135A2-201ENST00000384854 100 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 SAR1AP2-201ENST00000392696 594 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATXN3P54252 AC017079.2-201ENST00000416102 485 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.3□□□□□ -1.88
ATXN3P54252 MTCO2P5-201ENST00000422621 426 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 TRIAP1P1-201ENST00000427062 225 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 RPL23AP82-202ENST00000427528 469 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.3□□□□□ -1.88
ATXN3P54252 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.3□□□□□ -1.88
ATXN3P54252 AC024082.2-201ENST00000434771 238 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.3□□□□□ -1.88
ATXN3P54252 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.3□□□□□ -1.88
ATXN3P54252 FTH1P1-201ENST00000437933 532 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 AC025750.2-201ENST00000442609 450 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 CENPBD1P1-201ENST00000464061 469 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 AP002884.2-201ENST00000471647 395 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 AC006445.1-201ENST00000491925 405 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 AC114967.1-201ENST00000504890 259 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.3□□□□□ -1.88
ATXN3P54252 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATXN3P54252 AL359273.1-201ENST00000510918 627 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.3□□□□□ -1.88
ATXN3P54252 AC107934.2-201ENST00000518653 310 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.3□□□□□ -1.88
ATXN3P54252 AC104027.1-201ENST00000521887 300 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 HIGD1AP1-201ENST00000550979 275 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATXN3P54252 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.3□□□□□ -1.88
ATXN3P54252 OR4T1P-201ENST00000554933 911 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.3□□□□□ -1.88
ATXN3P54252 MIR3921-201ENST00000577308 85 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.3□□□□□ -1.88
ATXN3P54252 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.3□□□□□ -1.88
ATXN3P54252 AL133393.1-201ENST00000603277 287 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 AC004987.4-201ENST00000603383 338 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.3□□□□□ -1.88
ATXN3P54252 AC021749.1-201ENST00000604322 607 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 AC106791.2-201ENST00000604680 391 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 AC011330.2-201ENST00000621680 635 ntBASIC3.3□□□□□ -1.88
ATXN3P54252 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATXN3P54252 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
ATXN3P54252 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
ATXN3P54252 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.29□□□□□ -1.88
ATXN3P54252 AC005539.1-201ENST00000443768 1479 ntBASIC3.29□□□□□ -1.88
ATXN3P54252 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.29□□□□□ -1.88
ATXN3P54252 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.29□□□□□ -1.88
ATXN3P54252 AC009812.4-201ENST00000569134 1805 ntBASIC3.29□□□□□ -1.88
ATXN3P54252 SNORA14A-201ENST00000364773 135 ntBASIC3.29□□□□□ -1.88
ATXN3P54252 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATXN3P54252 SNORA40.2-201ENST00000390847 128 ntBASIC3.29□□□□□ -1.88
ATXN3P54252 MIR1290-201ENST00000408735 78 ntBASIC3.29□□□□□ -1.88
ATXN3P54252 AC007899.1-201ENST00000412776 775 ntBASIC3.29□□□□□ -1.88
ATXN3P54252 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.29□□□□□ -1.88
ATXN3P54252 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.29□□□□□ -1.88
ATXN3P54252 AL592447.1-201ENST00000447592 540 ntBASIC3.29□□□□□ -1.88
ATXN3P54252 AC125238.1-201ENST00000448842 249 ntBASIC3.29□□□□□ -1.88
ATXN3P54252 AC080014.1-201ENST00000496877 1201 ntBASIC3.29□□□□□ -1.88
ATXN3P54252 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.29□□□□□ -1.88
ATXN3P54252 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.29□□□□□ -1.88
ATXN3P54252 AC111000.2-201ENST00000507775 550 ntBASIC3.29□□□□□ -1.88
ATXN3P54252 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.29□□□□□ -1.88
ATXN3P54252 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.29□□□□□ -1.88
ATXN3P54252 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
ATXN3P54252 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.29□□□□□ -1.88
ATXN3P54252 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.29□□□□□ -1.88
ATXN3P54252 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.29□□□□□ -1.88
ATXN3P54252 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.29□□□□□ -1.88
ATXN3P54252 AC004853.1-201ENST00000604902 698 ntBASIC3.29□□□□□ -1.88
ATXN3P54252 AL451074.6-201ENST00000608512 729 ntBASIC3.29□□□□□ -1.88
ATXN3P54252 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.29□□□□□ -1.88
ATXN3P54252 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
ATXN3P54252 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATXN3P54252 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.29□□□□□ -1.88
ATXN3P54252 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ATXN3P54252 AC011460.1-201ENST00000636268 1834 ntBASIC3.28□□□□□ -1.88
ATXN3P54252 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
ATXN3P54252 SKINT1L-201ENST00000401057 817 ntBASIC3.28□□□□□ -1.88
ATXN3P54252 HMGB1P17-201ENST00000403495 628 ntBASIC3.28□□□□□ -1.88
ATXN3P54252 AL355143.1-201ENST00000407101 841 ntBASIC3.28□□□□□ -1.88
ATXN3P54252 AL592310.1-201ENST00000414330 671 ntBASIC3.28□□□□□ -1.88
ATXN3P54252 AC063979.1-201ENST00000415539 377 ntBASIC3.28□□□□□ -1.88
ATXN3P54252 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.28□□□□□ -1.88
ATXN3P54252 CCDC58P2-201ENST00000417131 366 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms