Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.24□□□□□ -1.73
COPAP53621 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.24□□□□□ -1.73
COPAP53621 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.24□□□□□ -1.73
COPAP53621 AF213884.1-201ENST00000488102 463 ntBASIC4.24□□□□□ -1.73
COPAP53621 AL358832.1-201ENST00000497800 389 ntBASIC4.24□□□□□ -1.73
COPAP53621 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.24□□□□□ -1.73
COPAP53621 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.24□□□□□ -1.73
COPAP53621 AF213884.2-201ENST00000510417 903 ntBASIC4.24□□□□□ -1.73
COPAP53621 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.24□□□□□ -1.73
COPAP53621 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.24□□□□□ -1.73
COPAP53621 AC017037.2-201ENST00000513850 890 ntBASIC4.24□□□□□ -1.73
COPAP53621 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
COPAP53621 SNORA18.6-201ENST00000516792 115 ntBASIC4.24□□□□□ -1.73
COPAP53621 RNU6-201P-201ENST00000517100 61 ntBASIC4.24□□□□□ -1.73
COPAP53621 AP003467.2-201ENST00000520175 319 ntBASIC4.24□□□□□ -1.73
COPAP53621 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.24□□□□□ -1.73
COPAP53621 MED28P5-201ENST00000528254 438 ntBASIC4.24□□□□□ -1.73
COPAP53621 AC016957.1-201ENST00000534895 309 ntBASIC4.24□□□□□ -1.73
COPAP53621 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.24□□□□□ -1.73
COPAP53621 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.24□□□□□ -1.73
COPAP53621 CR383656.7-201ENST00000548164 174 ntBASIC4.24□□□□□ -1.73
COPAP53621 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.24□□□□□ -1.73
COPAP53621 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.24□□□□□ -1.73
COPAP53621 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.24□□□□□ -1.73
COPAP53621 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.24□□□□□ -1.73
COPAP53621 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.24□□□□□ -1.73
COPAP53621 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.24□□□□□ -1.73
COPAP53621 RN7SL703P-201ENST00000578485 302 ntBASIC4.24□□□□□ -1.73
COPAP53621 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.24□□□□□ -1.73
COPAP53621 MIR4286-201ENST00000580651 93 ntBASIC4.24□□□□□ -1.73
COPAP53621 MTATP6P3-201ENST00000581686 676 ntBASIC4.24□□□□□ -1.73
COPAP53621 AC090578.1-201ENST00000604955 591 ntBASIC4.24□□□□□ -1.73
COPAP53621 AC098614.4-201ENST00000607601 462 ntBASIC4.24□□□□□ -1.73
COPAP53621 AC092794.1-201ENST00000612734 582 ntBASIC4.24□□□□□ -1.73
COPAP53621 AC013476.2-201ENST00000614456 459 ntBASIC4.24□□□□□ -1.73
COPAP53621 MIR6875-201ENST00000617506 72 ntBASIC4.24□□□□□ -1.73
COPAP53621 AL356585.4-201ENST00000623078 1229 ntBASIC4.24□□□□□ -1.73
COPAP53621 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.24□□□□□ -1.73
COPAP53621 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
COPAP53621 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
COPAP53621 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
COPAP53621 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.24□□□□□ -1.73
COPAP53621 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COPAP53621 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.24□□□□□ -1.73
COPAP53621 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COPAP53621 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.23□□□□□ -1.73
COPAP53621 AC244517.1-201ENST00000606030 2086 ntBASIC4.23□□□□□ -1.73
COPAP53621 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
COPAP53621 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COPAP53621 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
COPAP53621 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.23□□□□□ -1.73
COPAP53621 AC078974.1-201ENST00000411597 223 ntBASIC4.23□□□□□ -1.73
COPAP53621 C1DP2-201ENST00000418167 426 ntBASIC4.23□□□□□ -1.73
COPAP53621 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.23□□□□□ -1.73
COPAP53621 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.23□□□□□ -1.73
COPAP53621 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.23□□□□□ -1.73
COPAP53621 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.23□□□□□ -1.73
COPAP53621 RABEPKP1-201ENST00000440529 1026 ntBASIC4.23□□□□□ -1.73
COPAP53621 PGBD4P3-201ENST00000440731 581 ntBASIC4.23□□□□□ -1.73
COPAP53621 RPL17P49-201ENST00000443728 411 ntBASIC4.23□□□□□ -1.73
COPAP53621 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.23□□□□□ -1.73
COPAP53621 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.23□□□□□ -1.73
COPAP53621 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.23□□□□□ -1.73
COPAP53621 SNORD121B-201ENST00000458838 81 ntBASIC4.23□□□□□ -1.73
COPAP53621 SNORA84-201ENST00000459229 133 ntBASIC4.23□□□□□ -1.73
COPAP53621 RPL7P15-201ENST00000461190 712 ntBASIC4.23□□□□□ -1.73
COPAP53621 AC006517.1-201ENST00000480485 328 ntBASIC4.23□□□□□ -1.73
COPAP53621 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COPAP53621 RPL21P129-201ENST00000491732 478 ntBASIC4.23□□□□□ -1.73
COPAP53621 RN7SL604P-201ENST00000492589 296 ntBASIC4.23□□□□□ -1.73
COPAP53621 AL139099.1-201ENST00000497398 403 ntBASIC4.23□□□□□ -1.73
COPAP53621 AC146944.2-203ENST00000502493 354 ntBASIC4.23□□□□□ -1.73
COPAP53621 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.23□□□□□ -1.73
COPAP53621 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.23□□□□□ -1.73
COPAP53621 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.23□□□□□ -1.73
COPAP53621 SAP18P1-201ENST00000512058 390 ntBASIC4.23□□□□□ -1.73
COPAP53621 NPM1P41-201ENST00000512920 831 ntBASIC4.23□□□□□ -1.73
COPAP53621 AC139495.1-202ENST00000513164 354 ntBASIC4.23□□□□□ -1.73
COPAP53621 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.23□□□□□ -1.73
COPAP53621 AC022616.6-201ENST00000520479 119 ntBASIC4.23□□□□□ -1.73
COPAP53621 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.23□□□□□ -1.73
COPAP53621 AP000907.2-201ENST00000530827 353 ntBASIC4.23□□□□□ -1.73
COPAP53621 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.23□□□□□ -1.73
COPAP53621 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.23□□□□□ -1.73
COPAP53621 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.23□□□□□ -1.73
COPAP53621 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.23□□□□□ -1.73
COPAP53621 AC011468.4-201ENST00000603942 409 ntBASIC4.23□□□□□ -1.73
COPAP53621 U6atac.1-201ENST00000616025 117 ntBASIC4.23□□□□□ -1.73
COPAP53621 MIR7151-201ENST00000617477 60 ntBASIC4.23□□□□□ -1.73
COPAP53621 AC072046.2-201ENST00000618366 268 ntBASIC4.23□□□□□ -1.73
COPAP53621 AC009159.1-201ENST00000618386 642 ntBASIC4.23□□□□□ -1.73
COPAP53621 AC002550.2-201ENST00000621246 394 ntBASIC4.23□□□□□ -1.73
COPAP53621 AC099654.13-201ENST00000639774 207 ntBASIC4.23□□□□□ -1.73
COPAP53621 MTND5P33-201ENST00000571250 1450 ntBASIC4.23□□□□□ -1.73
COPAP53621 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COPAP53621 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COPAP53621 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
COPAP53621 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
COPAP53621 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.22□□□□□ -1.73
COPAP53621 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms