Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 BX322784.1-201ENST00000455793 1077 ntBASIC3.84□□□□□ -1.79
CLCN3P51790 ARPC3P2-201ENST00000457786 533 ntBASIC3.84□□□□□ -1.79
CLCN3P51790 HMGB1P25-201ENST00000468402 607 ntBASIC3.84□□□□□ -1.79
CLCN3P51790 RN7SL601P-201ENST00000471221 293 ntBASIC3.84□□□□□ -1.79
CLCN3P51790 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.84□□□□□ -1.79
CLCN3P51790 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.84□□□□□ -1.79
CLCN3P51790 MIR2114-201ENST00000516645 80 ntBASIC3.84□□□□□ -1.79
CLCN3P51790 IGKV2-26-201ENST00000518305 343 ntBASIC3.84□□□□□ -1.79
CLCN3P51790 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CLCN3P51790 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.84□□□□□ -1.79
CLCN3P51790 AC011611.1-201ENST00000552179 197 ntBASIC3.84□□□□□ -1.79
CLCN3P51790 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.84□□□□□ -1.79
CLCN3P51790 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.84□□□□□ -1.79
CLCN3P51790 AC012213.3-201ENST00000577199 777 ntBASIC3.84□□□□□ -1.79
CLCN3P51790 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLCN3P51790 AC025946.2-201ENST00000603398 234 ntBASIC3.84□□□□□ -1.79
CLCN3P51790 RN7SKP299-201ENST00000606679 301 ntBASIC3.84□□□□□ -1.79
CLCN3P51790 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLCN3P51790 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.84□□□□□ -1.79
CLCN3P51790 AL356596.1-201ENST00000624230 379 ntBASIC3.84□□□□□ -1.79
CLCN3P51790 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.84□□□□□ -1.79
CLCN3P51790 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.84□□□□□ -1.79
CLCN3P51790 AC006927.3-201ENST00000638789 384 ntBASIC3.84□□□□□ -1.79
CLCN3P51790 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLCN3P51790 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.8
CLCN3P51790 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CLCN3P51790 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CLCN3P51790 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.83□□□□□ -1.8
CLCN3P51790 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CLCN3P51790 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.83□□□□□ -1.8
CLCN3P51790 AL133383.2-201ENST00000622958 2336 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.83□□□□□ -1.8
CLCN3P51790 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLCN3P51790 AL161781.1-201ENST00000354277 403 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLCN3P51790 RNU4-75P-201ENST00000364621 146 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 MIR491-201ENST00000384877 84 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 MT-TH-201ENST00000387441 69 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 MIR1305-201ENST00000408300 86 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.83□□□□□ -1.8
CLCN3P51790 OR1AA1P-201ENST00000419597 916 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.83□□□□□ -1.8
CLCN3P51790 AL512649.1-201ENST00000428997 581 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 AC005326.1-201ENST00000429197 123 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.83□□□□□ -1.8
CLCN3P51790 AC005019.1-201ENST00000436455 431 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 RPL7P28-201ENST00000437739 740 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 HMGN2P21-201ENST00000447764 270 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 HMGB1P15-201ENST00000453854 435 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 AC007967.1-201ENST00000455422 1159 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 RN7SL594P-201ENST00000470590 287 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 AC023598.1-201ENST00000472521 361 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 AC093663.1-201ENST00000497190 394 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 PRELID3BP7-201ENST00000503606 469 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 COX7A2P2-201ENST00000505291 250 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 AC010424.1-201ENST00000506336 297 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 POU5F1P7-201ENST00000508759 541 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 AC022447.1-201ENST00000515358 464 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 SNORA70.24-201ENST00000517233 118 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLCN3P51790 OR5AP1P-201ENST00000529730 940 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.83□□□□□ -1.8
CLCN3P51790 SETP7-201ENST00000552169 453 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.83□□□□□ -1.8
CLCN3P51790 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.83□□□□□ -1.8
CLCN3P51790 MIR3200-201ENST00000580767 85 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 AP001004.1-201ENST00000582468 324 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.83□□□□□ -1.8
CLCN3P51790 AC008507.1-201ENST00000587506 734 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 BBIP1P1-201ENST00000602999 279 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.83□□□□□ -1.8
CLCN3P51790 AC112187.2-201ENST00000604345 283 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 AC055876.5-201ENST00000605667 259 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 AC091953.5-201ENST00000622919 233 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.83□□□□□ -1.8
CLCN3P51790 AC244517.1-201ENST00000606030 2086 ntBASIC3.83□□□□□ -1.8
CLCN3P51790 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.82□□□□□ -1.8
CLCN3P51790 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
CLCN3P51790 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLCN3P51790 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLCN3P51790 RNU1-18P-201ENST00000363062 164 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 RNU6-263P-201ENST00000363811 107 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 RNU6-343P-201ENST00000364709 104 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 RNU6-283P-201ENST00000364788 107 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 Y_RNA.553-201ENST00000384670 102 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 MIR23A-201ENST00000385245 73 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLCN3P51790 MIR320C1-201ENST00000408566 88 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCN3P51790 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLCN3P51790 EI24P1-201ENST00000416584 867 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCN3P51790 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCN3P51790 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.82□□□□□ -1.8
CLCN3P51790 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCN3P51790 USP9YP7-201ENST00000436723 430 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCN3P51790 OR6C5P-201ENST00000452388 923 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 USP9YP32-201ENST00000452432 430 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 HMGB3P30-201ENST00000457863 606 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms