Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USP11P51784 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP11P51784 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP11P51784 AC009313.2-201ENST00000417893 1941 ntBASIC5.42□□□□□ -1.54
USP11P51784 DHX9P1-201ENST00000436565 3076 ntBASIC5.42□□□□□ -1.54
USP11P51784 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
USP11P51784 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
USP11P51784 SNORD3H-201ENST00000384486 214 ntBASIC5.42□□□□□ -1.54
USP11P51784 MIR92A2-201ENST00000385299 75 ntBASIC5.42□□□□□ -1.54
USP11P51784 U3.35-201ENST00000408405 208 ntBASIC5.42□□□□□ -1.54
USP11P51784 RNU2-29P-201ENST00000410423 189 ntBASIC5.42□□□□□ -1.54
USP11P51784 RNU6-954P-201ENST00000411355 107 ntBASIC5.42□□□□□ -1.54
USP11P51784 RPL31P45-201ENST00000419532 356 ntBASIC5.42□□□□□ -1.54
USP11P51784 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.42□□□□□ -1.54
USP11P51784 AL669831.1-202ENST00000428504 417 ntBASIC5.42□□□□□ -1.54
USP11P51784 MTND2P29-201ENST00000438595 412 ntBASIC5.42□□□□□ -1.54
USP11P51784 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.42□□□□□ -1.54
USP11P51784 H2AFZP6-201ENST00000444403 394 ntBASIC5.42□□□□□ -1.54
USP11P51784 RPL12P25-201ENST00000455592 494 ntBASIC5.42□□□□□ -1.54
USP11P51784 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.42□□□□□ -1.54
USP11P51784 RPL21P6-201ENST00000479171 504 ntBASIC5.42□□□□□ -1.54
USP11P51784 NIP7P2-201ENST00000485801 544 ntBASIC5.42□□□□□ -1.54
USP11P51784 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.42□□□□□ -1.54
USP11P51784 AC091868.1-201ENST00000508746 304 ntBASIC5.42□□□□□ -1.54
USP11P51784 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.42□□□□□ -1.54
USP11P51784 RPL39P5-202ENST00000512505 151 ntBASIC5.42□□□□□ -1.54
USP11P51784 AC018797.3-201ENST00000513388 1241 ntBASIC5.42□□□□□ -1.54
USP11P51784 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.42□□□□□ -1.54
USP11P51784 AP002404.1-201ENST00000532005 451 ntBASIC5.42□□□□□ -1.54
USP11P51784 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.42□□□□□ -1.54
USP11P51784 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.42□□□□□ -1.54
USP11P51784 FKBP1BP1-201ENST00000553366 325 ntBASIC5.42□□□□□ -1.54
USP11P51784 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.42□□□□□ -1.54
USP11P51784 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.42□□□□□ -1.54
USP11P51784 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.42□□□□□ -1.54
USP11P51784 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.42□□□□□ -1.54
USP11P51784 FAM157A-202ENST00000615155 405 ntBASIC5.42□□□□□ -1.54
USP11P51784 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.42□□□□□ -1.54
USP11P51784 AC098657.3-201ENST00000620434 263 ntBASIC5.42□□□□□ -1.54
USP11P51784 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP11P51784 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
USP11P51784 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP11P51784 AL049641.1-201ENST00000441055 1948 ntBASIC5.42□□□□□ -1.54
USP11P51784 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP11P51784 MTND5P30-201ENST00000452896 1731 ntBASIC5.42□□□□□ -1.54
USP11P51784 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP11P51784 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
USP11P51784 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
USP11P51784 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP11P51784 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.42□□□□□ -1.54
USP11P51784 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
USP11P51784 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.41□□□□□ -1.54
USP11P51784 AC121333.1-201ENST00000567488 2709 ntBASIC5.41□□□□□ -1.54
USP11P51784 AL442639.1-201ENST00000625030 1899 ntBASIC5.41□□□□□ -1.54
USP11P51784 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP11P51784 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP11P51784 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP11P51784 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP11P51784 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.41□□□□□ -1.54
USP11P51784 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP11P51784 Y_RNA.482-201ENST00000384377 111 ntBASIC5.41□□□□□ -1.54
USP11P51784 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
USP11P51784 UBE2V1P2-201ENST00000397758 440 ntBASIC5.41□□□□□ -1.54
USP11P51784 DSTNP4-201ENST00000399472 474 ntBASIC5.41□□□□□ -1.54
USP11P51784 Y_RNA.646-201ENST00000410980 101 ntBASIC5.41□□□□□ -1.54
USP11P51784 VDAC1P9-201ENST00000412766 841 ntBASIC5.41□□□□□ -1.54
USP11P51784 ARL5AP1-201ENST00000418991 388 ntBASIC5.41□□□□□ -1.54
USP11P51784 CKS1BP6-201ENST00000424932 240 ntBASIC5.41□□□□□ -1.54
USP11P51784 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.41□□□□□ -1.54
USP11P51784 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.41□□□□□ -1.54
USP11P51784 MRPL48P1-201ENST00000445390 636 ntBASIC5.41□□□□□ -1.54
USP11P51784 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.41□□□□□ -1.54
USP11P51784 RNU6-1218P-201ENST00000458990 108 ntBASIC5.41□□□□□ -1.54
USP11P51784 AC090686.1-201ENST00000481577 749 ntBASIC5.41□□□□□ -1.54
USP11P51784 RPS27P27-201ENST00000498779 255 ntBASIC5.41□□□□□ -1.54
USP11P51784 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP11P51784 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.41□□□□□ -1.54
USP11P51784 AC107222.1-201ENST00000510899 637 ntBASIC5.41□□□□□ -1.54
USP11P51784 RN7SKP96-201ENST00000516948 297 ntBASIC5.41□□□□□ -1.54
USP11P51784 AC090136.1-201ENST00000520009 240 ntBASIC5.41□□□□□ -1.54
USP11P51784 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.41□□□□□ -1.54
USP11P51784 AP005902.1-201ENST00000521358 186 ntBASIC5.41□□□□□ -1.54
USP11P51784 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP11P51784 MIR4703-201ENST00000577728 79 ntBASIC5.41□□□□□ -1.54
USP11P51784 MIR6820-201ENST00000611508 62 ntBASIC5.41□□□□□ -1.54
USP11P51784 AC012409.4-201ENST00000612923 249 ntBASIC5.41□□□□□ -1.54
USP11P51784 uc_338.34-201ENST00000617467 174 ntBASIC5.41□□□□□ -1.54
USP11P51784 AC000123.2-201ENST00000623124 461 ntBASIC5.41□□□□□ -1.54
USP11P51784 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.41□□□□□ -1.54
USP11P51784 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.41□□□□□ -1.54
USP11P51784 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.41□□□□□ -1.54
USP11P51784 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP11P51784 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP11P51784 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
USP11P51784 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
USP11P51784 Z95327.2-201ENST00000414579 1873 ntBASIC5.41□□□□□ -1.54
USP11P51784 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.41□□□□□ -1.54
USP11P51784 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.4□□□□□ -1.54
USP11P51784 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.4□□□□□ -1.54
USP11P51784 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms