Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MIR4646-201ENST00000580775 63 ntBASIC3.74□□□□□ -1.81
SOX2P48431 AC105224.1-201ENST00000587055 421 ntBASIC3.74□□□□□ -1.81
SOX2P48431 AC008752.3-201ENST00000588113 712 ntBASIC3.74□□□□□ -1.81
SOX2P48431 OR7E18P-201ENST00000592589 702 ntBASIC3.74□□□□□ -1.81
SOX2P48431 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.74□□□□□ -1.81
SOX2P48431 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.74□□□□□ -1.81
SOX2P48431 AL162413.1-201ENST00000603198 110 ntBASIC3.74□□□□□ -1.81
SOX2P48431 AC079587.1-201ENST00000603846 277 ntBASIC3.74□□□□□ -1.81
SOX2P48431 AC133644.2-201ENST00000608142 540 ntBASIC3.74□□□□□ -1.81
SOX2P48431 AC064801.1-201ENST00000612025 407 ntBASIC3.74□□□□□ -1.81
SOX2P48431 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.74□□□□□ -1.81
SOX2P48431 AL021997.2-201ENST00000615674 271 ntBASIC3.74□□□□□ -1.81
SOX2P48431 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.74□□□□□ -1.81
SOX2P48431 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.74□□□□□ -1.81
SOX2P48431 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
SOX2P48431 MTND5P3-201ENST00000438536 1800 ntBASIC3.74□□□□□ -1.81
SOX2P48431 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SOX2P48431 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SOX2P48431 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.74□□□□□ -1.81
SOX2P48431 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SOX2P48431 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.73□□□□□ -1.81
SOX2P48431 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.73□□□□□ -1.81
SOX2P48431 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
SOX2P48431 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SOX2P48431 AC125257.1-201ENST00000560400 2930 ntBASIC3.73□□□□□ -1.81
SOX2P48431 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SOX2P48431 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.73□□□□□ -1.81
SOX2P48431 DHX40P1-201ENST00000588725 1412 ntBASIC3.73□□□□□ -1.81
SOX2P48431 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
SOX2P48431 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.73□□□□□ -1.81
SOX2P48431 RNU5E-8P-201ENST00000363502 116 ntBASIC3.73□□□□□ -1.81
SOX2P48431 U3.11-201ENST00000364476 212 ntBASIC3.73□□□□□ -1.81
SOX2P48431 Y_RNA.303-201ENST00000364998 94 ntBASIC3.73□□□□□ -1.81
SOX2P48431 U3.15-201ENST00000365398 212 ntBASIC3.73□□□□□ -1.81
SOX2P48431 MIR3074-201ENST00000384885 81 ntBASIC3.73□□□□□ -1.81
SOX2P48431 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SOX2P48431 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SOX2P48431 AL109941.1-201ENST00000401925 229 ntBASIC3.73□□□□□ -1.81
SOX2P48431 RNA5SP39-201ENST00000411245 120 ntBASIC3.73□□□□□ -1.81
SOX2P48431 AL139095.3-201ENST00000419672 1203 ntBASIC3.73□□□□□ -1.81
SOX2P48431 AL109913.1-201ENST00000421173 514 ntBASIC3.73□□□□□ -1.81
SOX2P48431 RPL23AP38-201ENST00000423801 469 ntBASIC3.73□□□□□ -1.81
SOX2P48431 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.73□□□□□ -1.81
SOX2P48431 AL627308.1-201ENST00000435693 821 ntBASIC3.73□□□□□ -1.81
SOX2P48431 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SOX2P48431 RPL23AP89-201ENST00000439324 255 ntBASIC3.73□□□□□ -1.81
SOX2P48431 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.73□□□□□ -1.81
SOX2P48431 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.73□□□□□ -1.81
SOX2P48431 AL451050.1-201ENST00000450126 415 ntBASIC3.73□□□□□ -1.81
SOX2P48431 MTND3P10-201ENST00000450967 341 ntBASIC3.73□□□□□ -1.81
SOX2P48431 RNU6-420P-201ENST00000458780 107 ntBASIC3.73□□□□□ -1.81
SOX2P48431 RPL21P126-201ENST00000470049 478 ntBASIC3.73□□□□□ -1.81
SOX2P48431 RPS3AP50-201ENST00000487064 803 ntBASIC3.73□□□□□ -1.81
SOX2P48431 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SOX2P48431 AC104164.2-201ENST00000496953 495 ntBASIC3.73□□□□□ -1.81
SOX2P48431 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
SOX2P48431 AC068305.1-201ENST00000497406 726 ntBASIC3.73□□□□□ -1.81
SOX2P48431 AC135721.1-201ENST00000497954 479 ntBASIC3.73□□□□□ -1.81
SOX2P48431 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SOX2P48431 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SOX2P48431 AC114797.1-201ENST00000514003 728 ntBASIC3.73□□□□□ -1.81
SOX2P48431 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.73□□□□□ -1.81
SOX2P48431 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.73□□□□□ -1.81
SOX2P48431 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SOX2P48431 AC006064.5-201ENST00000541782 248 ntBASIC3.73□□□□□ -1.81
SOX2P48431 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.73□□□□□ -1.81
SOX2P48431 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.73□□□□□ -1.81
SOX2P48431 HMGB1P6-201ENST00000569046 646 ntBASIC3.73□□□□□ -1.81
SOX2P48431 AC069061.3-201ENST00000582254 823 ntBASIC3.73□□□□□ -1.81
SOX2P48431 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.73□□□□□ -1.81
SOX2P48431 NRBF2P5-201ENST00000603087 788 ntBASIC3.73□□□□□ -1.81
SOX2P48431 AL354984.3-201ENST00000604803 325 ntBASIC3.73□□□□□ -1.81
SOX2P48431 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SOX2P48431 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.73□□□□□ -1.81
SOX2P48431 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
SOX2P48431 AC233309.1-201ENST00000619522 751 ntBASIC3.73□□□□□ -1.81
SOX2P48431 AC068870.2-201ENST00000620635 389 ntBASIC3.73□□□□□ -1.81
SOX2P48431 AC244100.1-202ENST00000621554 382 ntBASIC3.73□□□□□ -1.81
SOX2P48431 DUXAP9-208ENST00000622815 614 ntBASIC3.73□□□□□ -1.81
SOX2P48431 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.73□□□□□ -1.81
SOX2P48431 AC018445.2-201ENST00000622987 260 ntBASIC3.73□□□□□ -1.81
SOX2P48431 AC006065.5-201ENST00000623427 349 ntBASIC3.73□□□□□ -1.81
SOX2P48431 AC008785.1-201ENST00000624475 456 ntBASIC3.73□□□□□ -1.81
SOX2P48431 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SOX2P48431 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SOX2P48431 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.73□□□□□ -1.81
SOX2P48431 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SOX2P48431 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SOX2P48431 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SOX2P48431 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SOX2P48431 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SOX2P48431 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.73□□□□□ -1.81
SOX2P48431 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.73□□□□□ -1.81
SOX2P48431 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SOX2P48431 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SOX2P48431 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SOX2P48431 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SOX2P48431 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.72□□□□□ -1.81
SOX2P48431 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SOX2P48431 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms