Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA4P43681 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA4P43681 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA4P43681 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CHRNA4P43681 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA4P43681 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
CHRNA4P43681 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA4P43681 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA4P43681 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CHRNA4P43681 RNU1-19P-201ENST00000363306 165 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 RNU1-146P-201ENST00000364015 165 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 RNY3P11-201ENST00000364153 102 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 RNU6-1078P-201ENST00000364522 103 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 OR1L6-202ENST00000373684 1044 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 Y_RNA.471-201ENST00000384312 102 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 SNORD20-201ENST00000384550 80 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 MIR105-1-201ENST00000385222 81 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 RNU6-1168P-201ENST00000390831 104 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 RNU6-550P-201ENST00000391057 101 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC5.34□□□□□ -1.55
CHRNA4P43681 AC079355.1-201ENST00000421770 223 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 AL445305.1-201ENST00000432577 575 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 CFL1P1-202ENST00000432948 411 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 OR4C10P-201ENST00000434991 931 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 RHOT1P3-201ENST00000436571 331 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.34□□□□□ -1.55
CHRNA4P43681 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CHRNA4P43681 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.34□□□□□ -1.55
CHRNA4P43681 NUTF2P3-201ENST00000448540 384 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.34□□□□□ -1.55
CHRNA4P43681 RPL21P8-201ENST00000465083 535 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 AC091021.1-201ENST00000468051 388 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 RN7SL447P-201ENST00000494711 245 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 AC020893.1-201ENST00000502452 580 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 AC096745.1-201ENST00000509945 370 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.34□□□□□ -1.55
CHRNA4P43681 RNU7-4P-201ENST00000516961 62 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 MTND5P41-201ENST00000517498 206 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 AC034114.1-201ENST00000520293 285 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 DEFB108E-201ENST00000524692 240 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.34□□□□□ -1.55
CHRNA4P43681 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.34□□□□□ -1.55
CHRNA4P43681 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.34□□□□□ -1.55
CHRNA4P43681 AC090022.1-201ENST00000546569 311 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 AC026371.1-201ENST00000551867 419 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC5.34□□□□□ -1.55
CHRNA4P43681 AC004584.2-201ENST00000570407 410 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CHRNA4P43681 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CHRNA4P43681 FKBP1AP1-201ENST00000594588 318 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 AC103710.2-202ENST00000641454 2853 ntBASIC5.34□□□□□ -1.55
CHRNA4P43681 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA4P43681 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
CHRNA4P43681 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA4P43681 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CHRNA4P43681 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.56
CHRNA4P43681 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.34□□□□□ -1.56
CHRNA4P43681 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CHRNA4P43681 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA4P43681 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA4P43681 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA4P43681 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CHRNA4P43681 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA4P43681 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA4P43681 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA4P43681 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA4P43681 RN7SKP160-201ENST00000363804 340 ntBASIC5.33□□□□□ -1.56
CHRNA4P43681 SNORA23-201ENST00000365128 182 ntBASIC5.33□□□□□ -1.56
CHRNA4P43681 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA4P43681 RNU6-444P-201ENST00000383988 108 ntBASIC5.33□□□□□ -1.56
CHRNA4P43681 SNORA24.1-201ENST00000384401 135 ntBASIC5.33□□□□□ -1.56
CHRNA4P43681 RNU6-441P-201ENST00000384545 106 ntBASIC5.33□□□□□ -1.56
CHRNA4P43681 RNU6-417P-201ENST00000384712 107 ntBASIC5.33□□□□□ -1.56
CHRNA4P43681 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.33□□□□□ -1.56
CHRNA4P43681 RPL7L1P9-201ENST00000431298 745 ntBASIC5.33□□□□□ -1.56
CHRNA4P43681 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.33□□□□□ -1.56
CHRNA4P43681 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.33□□□□□ -1.56
CHRNA4P43681 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.33□□□□□ -1.56
CHRNA4P43681 OR2AQ1P-201ENST00000451972 200 ntBASIC5.33□□□□□ -1.56
CHRNA4P43681 CYCSP34-201ENST00000458172 304 ntBASIC5.33□□□□□ -1.56
CHRNA4P43681 RPL21P104-201ENST00000464143 478 ntBASIC5.33□□□□□ -1.56
CHRNA4P43681 AL133445.1-201ENST00000467051 452 ntBASIC5.33□□□□□ -1.56
CHRNA4P43681 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.33□□□□□ -1.56
CHRNA4P43681 RPS4XP1-201ENST00000482189 787 ntBASIC5.33□□□□□ -1.56
CHRNA4P43681 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.33□□□□□ -1.56
CHRNA4P43681 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.33□□□□□ -1.56
CHRNA4P43681 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.33□□□□□ -1.56
CHRNA4P43681 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.33□□□□□ -1.56
CHRNA4P43681 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.33□□□□□ -1.56
CHRNA4P43681 RNU6-488P-201ENST00000515918 99 ntBASIC5.33□□□□□ -1.56
CHRNA4P43681 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.33□□□□□ -1.56
CHRNA4P43681 CBX3P8-201ENST00000532412 525 ntBASIC5.33□□□□□ -1.56
CHRNA4P43681 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.33□□□□□ -1.56
CHRNA4P43681 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.33□□□□□ -1.56
CHRNA4P43681 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.33□□□□□ -1.56
CHRNA4P43681 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.33□□□□□ -1.56
CHRNA4P43681 Z83818.1-201ENST00000603584 150 ntBASIC5.33□□□□□ -1.56
CHRNA4P43681 AL162431.4-201ENST00000604674 411 ntBASIC5.33□□□□□ -1.56
CHRNA4P43681 AC008162.1-201ENST00000604718 254 ntBASIC5.33□□□□□ -1.56
CHRNA4P43681 AL670379.4-201ENST00000605279 254 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms