Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXD13P35453 HMGB3P8-201ENST00000449709 577 ntBASIC3.77□□□□□ -1.81
HOXD13P35453 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXD13P35453 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXD13P35453 ARPC3P2-201ENST00000457786 533 ntBASIC3.77□□□□□ -1.81
HOXD13P35453 AC021205.2-201ENST00000480069 347 ntBASIC3.77□□□□□ -1.81
HOXD13P35453 HMGB1P36-201ENST00000487709 576 ntBASIC3.77□□□□□ -1.81
HOXD13P35453 CBX3P3-201ENST00000508108 532 ntBASIC3.77□□□□□ -1.81
HOXD13P35453 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXD13P35453 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXD13P35453 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXD13P35453 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXD13P35453 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXD13P35453 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXD13P35453 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.77□□□□□ -1.81
HOXD13P35453 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXD13P35453 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.77□□□□□ -1.81
HOXD13P35453 AC005476.1-201ENST00000554427 397 ntBASIC3.77□□□□□ -1.81
HOXD13P35453 AC009094.1-201ENST00000564443 426 ntBASIC3.77□□□□□ -1.81
HOXD13P35453 BNIP3P23-201ENST00000599655 511 ntBASIC3.77□□□□□ -1.81
HOXD13P35453 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXD13P35453 AP000811.1-201ENST00000603803 651 ntBASIC3.77□□□□□ -1.81
HOXD13P35453 SNORA51-201ENST00000606420 132 ntBASIC3.77□□□□□ -1.81
HOXD13P35453 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXD13P35453 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXD13P35453 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXD13P35453 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXD13P35453 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
HOXD13P35453 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXD13P35453 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXD13P35453 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
HOXD13P35453 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXD13P35453 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HOXD13P35453 RNA5SP197-201ENST00000363357 119 ntBASIC3.76□□□□□ -1.81
HOXD13P35453 Y_RNA.302-201ENST00000364997 102 ntBASIC3.76□□□□□ -1.81
HOXD13P35453 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXD13P35453 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXD13P35453 RNU6-637P-201ENST00000384050 107 ntBASIC3.76□□□□□ -1.81
HOXD13P35453 RPS3AP24-201ENST00000407896 734 ntBASIC3.76□□□□□ -1.81
HOXD13P35453 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXD13P35453 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXD13P35453 YPEL5P1-201ENST00000419731 367 ntBASIC3.76□□□□□ -1.81
HOXD13P35453 BX119904.4-201ENST00000424402 301 ntBASIC3.76□□□□□ -1.81
HOXD13P35453 MTATP6P4-201ENST00000427725 675 ntBASIC3.76□□□□□ -1.81
HOXD13P35453 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.76□□□□□ -1.81
HOXD13P35453 SNRPEP4-201ENST00000435815 279 ntBASIC3.76□□□□□ -1.81
HOXD13P35453 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.76□□□□□ -1.81
HOXD13P35453 AL117351.1-201ENST00000438864 766 ntBASIC3.76□□□□□ -1.81
HOXD13P35453 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.76□□□□□ -1.81
HOXD13P35453 AL831737.1-201ENST00000441288 271 ntBASIC3.76□□□□□ -1.81
HOXD13P35453 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXD13P35453 AP000542.1-201ENST00000448473 371 ntBASIC3.76□□□□□ -1.81
HOXD13P35453 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXD13P35453 AC104308.1-201ENST00000454621 333 ntBASIC3.76□□□□□ -1.81
HOXD13P35453 AC072039.1-201ENST00000477611 581 ntBASIC3.76□□□□□ -1.81
HOXD13P35453 AC004263.1-201ENST00000479327 332 ntBASIC3.76□□□□□ -1.81
HOXD13P35453 AC020893.1-201ENST00000502452 580 ntBASIC3.76□□□□□ -1.81
HOXD13P35453 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.76□□□□□ -1.81
HOXD13P35453 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXD13P35453 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXD13P35453 NDUFB9P3-201ENST00000521269 501 ntBASIC3.76□□□□□ -1.81
HOXD13P35453 AP003497.1-201ENST00000528472 562 ntBASIC3.76□□□□□ -1.81
HOXD13P35453 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXD13P35453 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.76□□□□□ -1.81
HOXD13P35453 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.76□□□□□ -1.81
HOXD13P35453 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXD13P35453 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXD13P35453 COX6CP3-201ENST00000580869 223 ntBASIC3.76□□□□□ -1.81
HOXD13P35453 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.76□□□□□ -1.81
HOXD13P35453 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.76□□□□□ -1.81
HOXD13P35453 AL450472.3-201ENST00000615578 367 ntBASIC3.76□□□□□ -1.81
HOXD13P35453 AL031667.3-201ENST00000620124 655 ntBASIC3.76□□□□□ -1.81
HOXD13P35453 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HOXD13P35453 AC118273.1-201ENST00000525324 3006 ntBASIC3.76□□□□□ -1.81
HOXD13P35453 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
HOXD13P35453 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXD13P35453 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.76□□□□□ -1.81
HOXD13P35453 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXD13P35453 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
HOXD13P35453 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HOXD13P35453 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HOXD13P35453 AP000526.1-201ENST00000603308 1388 ntBASIC3.76□□□□□ -1.81
HOXD13P35453 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.75□□□□□ -1.81
HOXD13P35453 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HOXD13P35453 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXD13P35453 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.75□□□□□ -1.81
HOXD13P35453 AP002088.1-201ENST00000382740 395 ntBASIC3.75□□□□□ -1.81
HOXD13P35453 RNU5A-2P-201ENST00000384337 116 ntBASIC3.75□□□□□ -1.81
HOXD13P35453 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HOXD13P35453 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HOXD13P35453 RN7SKP111-201ENST00000410349 271 ntBASIC3.75□□□□□ -1.81
HOXD13P35453 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXD13P35453 Z99755.1-201ENST00000414048 380 ntBASIC3.75□□□□□ -1.81
HOXD13P35453 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXD13P35453 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXD13P35453 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.75□□□□□ -1.81
HOXD13P35453 OR4K11P-201ENST00000431829 904 ntBASIC3.75□□□□□ -1.81
HOXD13P35453 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXD13P35453 SETP5-201ENST00000437270 562 ntBASIC3.75□□□□□ -1.81
HOXD13P35453 MTCYBP39-201ENST00000437562 491 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms