Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC015917.1-201ENST00000579654 510 ntBASIC3.48□□□□□ -1.85
CTNNA1P35221 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.48□□□□□ -1.85
CTNNA1P35221 AC006270.3-201ENST00000605967 1036 ntBASIC3.48□□□□□ -1.85
CTNNA1P35221 MIR4275-201ENST00000636486 87 ntBASIC3.48□□□□□ -1.85
CTNNA1P35221 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.48□□□□□ -1.85
CTNNA1P35221 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.48□□□□□ -1.85
CTNNA1P35221 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.48□□□□□ -1.85
CTNNA1P35221 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.47□□□□□ -1.85
CTNNA1P35221 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CTNNA1P35221 Y_RNA.192-201ENST00000363977 102 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 AL359837.1-201ENST00000381357 287 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 SNORA36C-201ENST00000384289 132 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 RNU6-1207P-201ENST00000384343 107 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.47□□□□□ -1.85
CTNNA1P35221 RNA5SP229-201ENST00000410809 99 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.47□□□□□ -1.85
CTNNA1P35221 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CTNNA1P35221 BX119904.4-201ENST00000424402 301 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.47□□□□□ -1.85
CTNNA1P35221 ATP5F1P1-201ENST00000433775 569 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 CST9LP2-201ENST00000437612 320 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 AC091862.1-201ENST00000438016 1100 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.47□□□□□ -1.85
CTNNA1P35221 AC092641.1-201ENST00000440229 772 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 ATP5C1P1-201ENST00000441945 895 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 EXOSC3P1-201ENST00000448649 500 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 MTND2P24-201ENST00000453434 806 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.47□□□□□ -1.85
CTNNA1P35221 MEMO1P3-201ENST00000459811 302 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 AC091179.1-201ENST00000461606 579 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 AC068587.1-201ENST00000483613 781 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.47□□□□□ -1.85
CTNNA1P35221 RNU6-1256P-201ENST00000516539 103 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.47□□□□□ -1.85
CTNNA1P35221 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.47□□□□□ -1.85
CTNNA1P35221 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.47□□□□□ -1.85
CTNNA1P35221 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.47□□□□□ -1.85
CTNNA1P35221 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.47□□□□□ -1.85
CTNNA1P35221 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.47□□□□□ -1.85
CTNNA1P35221 ACTR3BP3-201ENST00000565577 979 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.47□□□□□ -1.85
CTNNA1P35221 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.47□□□□□ -1.85
CTNNA1P35221 AL160237.3-201ENST00000604114 1013 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 AC013553.2-201ENST00000604244 589 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.47□□□□□ -1.85
CTNNA1P35221 uc_338.1-201ENST00000612113 180 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.47□□□□□ -1.85
CTNNA1P35221 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CTNNA1P35221 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CTNNA1P35221 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CTNNA1P35221 AL161912.2-201ENST00000565707 3007 ntBASIC3.47□□□□□ -1.85
CTNNA1P35221 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CTNNA1P35221 AC011477.1-204ENST00000623416 1325 ntBASIC3.46□□□□□ -1.85
CTNNA1P35221 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CTNNA1P35221 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CTNNA1P35221 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CTNNA1P35221 RNA5SP119-201ENST00000362715 117 ntBASIC3.46□□□□□ -1.86
CTNNA1P35221 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CTNNA1P35221 AC018630.2-202ENST00000422992 927 ntBASIC3.46□□□□□ -1.86
CTNNA1P35221 AL512844.2-201ENST00000433990 593 ntBASIC3.46□□□□□ -1.86
CTNNA1P35221 SNRPEP7-201ENST00000438350 220 ntBASIC3.46□□□□□ -1.86
CTNNA1P35221 LSM1P1-201ENST00000438629 273 ntBASIC3.46□□□□□ -1.86
CTNNA1P35221 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.46□□□□□ -1.86
CTNNA1P35221 MTND1P31-201ENST00000449206 961 ntBASIC3.46□□□□□ -1.86
CTNNA1P35221 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.46□□□□□ -1.86
CTNNA1P35221 RNU6-420P-201ENST00000458780 107 ntBASIC3.46□□□□□ -1.86
CTNNA1P35221 RPL30P9-201ENST00000465586 330 ntBASIC3.46□□□□□ -1.86
CTNNA1P35221 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.46□□□□□ -1.86
CTNNA1P35221 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.46□□□□□ -1.86
CTNNA1P35221 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.46□□□□□ -1.86
CTNNA1P35221 MTND3P3-201ENST00000505004 126 ntBASIC3.46□□□□□ -1.86
CTNNA1P35221 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.46□□□□□ -1.86
CTNNA1P35221 TTC39CP1-201ENST00000512513 755 ntBASIC3.46□□□□□ -1.86
CTNNA1P35221 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.46□□□□□ -1.86
CTNNA1P35221 RNA5SP217-201ENST00000515959 91 ntBASIC3.46□□□□□ -1.86
CTNNA1P35221 SCARNA15.2-201ENST00000516409 127 ntBASIC3.46□□□□□ -1.86
CTNNA1P35221 RNA5SP380-201ENST00000517190 98 ntBASIC3.46□□□□□ -1.86
CTNNA1P35221 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.46□□□□□ -1.86
CTNNA1P35221 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.46□□□□□ -1.86
CTNNA1P35221 HIGD1AP1-201ENST00000550979 275 ntBASIC3.46□□□□□ -1.86
CTNNA1P35221 AC124947.2-202ENST00000552735 133 ntBASIC3.46□□□□□ -1.86
CTNNA1P35221 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
CTNNA1P35221 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.46□□□□□ -1.86
CTNNA1P35221 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.46□□□□□ -1.86
CTNNA1P35221 AL133507.1-201ENST00000605269 557 ntBASIC3.46□□□□□ -1.86
CTNNA1P35221 AC004832.5-201ENST00000608677 401 ntBASIC3.46□□□□□ -1.86
CTNNA1P35221 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.46□□□□□ -1.86
CTNNA1P35221 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.46□□□□□ -1.86
CTNNA1P35221 AP000526.1-201ENST00000603308 1388 ntBASIC3.46□□□□□ -1.86
CTNNA1P35221 DDX43P2-201ENST00000604753 1354 ntBASIC3.46□□□□□ -1.86
CTNNA1P35221 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
CTNNA1P35221 FAM35CP-201ENST00000554755 2470 ntBASIC3.46□□□□□ -1.86
CTNNA1P35221 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CTNNA1P35221 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CTNNA1P35221 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.45□□□□□ -1.86
CTNNA1P35221 RNU5E-8P-201ENST00000363502 116 ntBASIC3.45□□□□□ -1.86
CTNNA1P35221 RNU4-68P-201ENST00000364314 141 ntBASIC3.45□□□□□ -1.86
CTNNA1P35221 SNORD116.1-201ENST00000365628 92 ntBASIC3.45□□□□□ -1.86
CTNNA1P35221 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms