Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.89□□□□□ -1.95
SHMT2P34897 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.89□□□□□ -1.95
SHMT2P34897 RNU6-1225P-201ENST00000516336 65 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 RN7SKP282-201ENST00000516824 299 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.89□□□□□ -1.95
SHMT2P34897 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.89□□□□□ -1.95
SHMT2P34897 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.89□□□□□ -1.95
SHMT2P34897 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.89□□□□□ -1.95
SHMT2P34897 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.89□□□□□ -1.95
SHMT2P34897 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.89□□□□□ -1.95
SHMT2P34897 OR4P1P-201ENST00000530808 1136 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.89□□□□□ -1.95
SHMT2P34897 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.89□□□□□ -1.95
SHMT2P34897 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.89□□□□□ -1.95
SHMT2P34897 BNIP3P24-201ENST00000593398 557 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 RPL23AP92-201ENST00000603609 255 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 AL121652.1-201ENST00000608851 448 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 AC069234.5-201ENST00000611056 416 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 AL138478.1-201ENST00000612252 832 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 AC092650.2-201ENST00000619984 902 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 AL590240.3-201ENST00000621416 943 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 U6.101-201ENST00000637707 76 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.89□□□□□ -1.95
SHMT2P34897 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.88□□□□□ -1.95
SHMT2P34897 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
SHMT2P34897 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
SHMT2P34897 OR5H2-201ENST00000355273 945 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SHMT2P34897 SNORD51-201ENST00000384320 80 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 AL354719.1-201ENST00000406535 843 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SHMT2P34897 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.88□□□□□ -1.95
SHMT2P34897 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.88□□□□□ -1.95
SHMT2P34897 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.88□□□□□ -1.95
SHMT2P34897 AC012497.1-201ENST00000429392 575 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.88□□□□□ -1.95
SHMT2P34897 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.88□□□□□ -1.95
SHMT2P34897 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.88□□□□□ -1.95
SHMT2P34897 RPS15AP17-201ENST00000470598 390 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 RN7SL633P-201ENST00000488974 297 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 AC096751.1-202ENST00000502691 1067 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.88□□□□□ -1.95
SHMT2P34897 AC083906.5-201ENST00000503722 328 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.88□□□□□ -1.95
SHMT2P34897 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.88□□□□□ -1.95
SHMT2P34897 AC113347.3-201ENST00000509113 148 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 AC010374.2-201ENST00000512933 535 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.88□□□□□ -1.95
SHMT2P34897 SNORD59.2-201ENST00000516873 68 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 AC104986.1-201ENST00000517978 436 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SHMT2P34897 HIGD1AP17-201ENST00000554576 276 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.88□□□□□ -1.95
SHMT2P34897 AC034268.2-201ENST00000571784 482 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 AL109653.1-201ENST00000603091 248 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 AL035411.2-201ENST00000604022 421 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 AL160281.1-201ENST00000605307 311 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 AL391834.2-201ENST00000609982 546 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 AL390240.1-201ENST00000612950 384 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 AC104763.3-201ENST00000613765 618 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 ATP5A1P2-202ENST00000616464 443 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 AC007318.2-201ENST00000620999 243 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 AL353748.2-201ENST00000622148 471 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.88□□□□□ -1.95
SHMT2P34897 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.88□□□□□ -1.95
SHMT2P34897 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.88□□□□□ -1.95
SHMT2P34897 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SHMT2P34897 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SHMT2P34897 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.87□□□□□ -1.95
SHMT2P34897 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SHMT2P34897 SNORA9.2-201ENST00000365361 133 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.87□□□□□ -1.95
SHMT2P34897 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
SHMT2P34897 SNORD116-12-201ENST00000384468 92 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 AC068533.2-201ENST00000411872 306 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 AC099677.1-201ENST00000420575 175 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 MRPS36P1-201ENST00000421291 307 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.87□□□□□ -1.95
SHMT2P34897 AC079780.1-201ENST00000428259 207 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 HSFY7P-201ENST00000432672 318 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 HSFY8P-201ENST00000437934 318 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.87□□□□□ -1.95
SHMT2P34897 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
SHMT2P34897 MTCYBP11-201ENST00000447254 1109 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.87□□□□□ -1.95
SHMT2P34897 RPL39P6-201ENST00000448289 150 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 HSFY5P-201ENST00000453726 309 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 HMGB1P15-201ENST00000453854 435 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 AC026410.2-201ENST00000460281 156 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 AC104164.3-201ENST00000467363 1258 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 HMGN2P13-201ENST00000476476 274 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SHMT2P34897 AC108734.3-201ENST00000481241 1165 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 AC011825.1-201ENST00000484967 388 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 RPL21P131-201ENST00000497298 483 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 AC026412.2-201ENST00000512270 1075 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.87□□□□□ -1.95
SHMT2P34897 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms