Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 MIR4697-201ENST00000582977 78 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXC12P31275 AC069307.1-201ENST00000602820 447 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 APOOP1-201ENST00000604695 592 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 AC245389.1-201ENST00000605141 529 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 DUSP12P1-201ENST00000612874 516 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 AC084781.2-201ENST00000615568 161 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXC12P31275 MTND4LP32-201ENST00000636111 270 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 AC121333.1-201ENST00000567488 2709 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HOXC12P31275 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC12P31275 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC12P31275 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC12P31275 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HOXC12P31275 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC12P31275 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HOXC12P31275 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC12P31275 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC12P31275 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXC12P31275 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXC12P31275 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC12P31275 MTND4P27-201ENST00000450813 1354 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC12P31275 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC12P31275 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC12P31275 THAP12P5-201ENST00000405864 2275 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXC12P31275 AC114947.2-201ENST00000565748 2125 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC12P31275 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HOXC12P31275 AL137003.2-201ENST00000606924 2538 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HOXC12P31275 SNORA16A-201ENST00000384342 137 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 RNU6-1297P-201ENST00000384415 104 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 AL583834.1-201ENST00000406943 343 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXC12P31275 AC245028.1-201ENST00000423259 256 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXC12P31275 AL161722.2-201ENST00000434731 981 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXC12P31275 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXC12P31275 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXC12P31275 AC107399.1-201ENST00000451226 265 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 AL645939.1-201ENST00000453429 797 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 Y_RNA.635-201ENST00000459041 101 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 AC096576.1-201ENST00000489014 359 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 AC106872.2-201ENST00000494303 480 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 AC108145.1-201ENST00000503770 153 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 KLHL2P1-201ENST00000508691 521 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXC12P31275 RNU6-1170P-201ENST00000515974 106 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 RNA5SP497-201ENST00000516081 97 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 RNU6-685P-201ENST00000517088 95 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 SNORA25.17-201ENST00000517184 124 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 AC012400.1-201ENST00000518452 381 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 AC090136.1-201ENST00000520009 240 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 AP000889.2-201ENST00000532684 490 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.66□□□□□ -1.66
HOXC12P31275 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXC12P31275 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXC12P31275 OR4H12P-201ENST00000556269 907 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.66□□□□□ -1.66
HOXC12P31275 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXC12P31275 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXC12P31275 MIR4660-201ENST00000583549 74 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXC12P31275 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXC12P31275 AL138889.2-201ENST00000603883 242 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXC12P31275 AC244107.2-201ENST00000611773 76 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 AC012409.4-201ENST00000612923 249 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 uc_338.18-201ENST00000615451 175 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 AC007546.1-201ENST00000619452 559 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC12P31275 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC12P31275 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXC12P31275 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC12P31275 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.66□□□□□ -1.66
HOXC12P31275 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC12P31275 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
HOXC12P31275 AC103710.2-202ENST00000641454 2853 ntBASIC4.66□□□□□ -1.66
HOXC12P31275 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HOXC12P31275 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HOXC12P31275 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
HOXC12P31275 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
HOXC12P31275 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HOXC12P31275 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HOXC12P31275 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
HOXC12P31275 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HOXC12P31275 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
HOXC12P31275 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.65□□□□□ -1.66
HOXC12P31275 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HOXC12P31275 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
HOXC12P31275 MIR548F5-201ENST00000408421 86 ntBASIC4.65□□□□□ -1.67
HOXC12P31275 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.65□□□□□ -1.67
HOXC12P31275 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXC12P31275 PPP1R11P2-201ENST00000423543 382 ntBASIC4.65□□□□□ -1.67
HOXC12P31275 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms