Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.27□□□□□ -2.05
COL4A5P29400 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
COL4A5P29400 MIR1294-201ENST00000408503 142 ntBASIC2.27□□□□□ -2.05
COL4A5P29400 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.27□□□□□ -2.05
COL4A5P29400 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC2.27□□□□□ -2.05
COL4A5P29400 AC009961.3-201ENST00000449832 765 ntBASIC2.27□□□□□ -2.05
COL4A5P29400 MTND2P8-201ENST00000450555 1025 ntBASIC2.27□□□□□ -2.05
COL4A5P29400 AC104564.1-201ENST00000493028 407 ntBASIC2.27□□□□□ -2.05
COL4A5P29400 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC2.27□□□□□ -2.05
COL4A5P29400 AC011352.3-201ENST00000505162 593 ntBASIC2.27□□□□□ -2.05
COL4A5P29400 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.27□□□□□ -2.05
COL4A5P29400 TMEM248P1-201ENST00000510579 951 ntBASIC2.27□□□□□ -2.05
COL4A5P29400 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.27□□□□□ -2.05
COL4A5P29400 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.27□□□□□ -2.05
COL4A5P29400 FAM92A1P1-201ENST00000528023 890 ntBASIC2.27□□□□□ -2.05
COL4A5P29400 CBX3P5-201ENST00000552017 521 ntBASIC2.27□□□□□ -2.05
COL4A5P29400 DNAJC19P9-201ENST00000555084 351 ntBASIC2.27□□□□□ -2.05
COL4A5P29400 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC2.27□□□□□ -2.05
COL4A5P29400 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.27□□□□□ -2.05
COL4A5P29400 AC090525.3-201ENST00000605601 189 ntBASIC2.27□□□□□ -2.05
COL4A5P29400 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
COL4A5P29400 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
COL4A5P29400 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
COL4A5P29400 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
COL4A5P29400 RNA5SP160-201ENST00000364866 120 ntBASIC2.26□□□□□ -2.05
COL4A5P29400 RNU6-356P-201ENST00000384140 107 ntBASIC2.26□□□□□ -2.05
COL4A5P29400 RNA5SP344-201ENST00000411081 104 ntBASIC2.26□□□□□ -2.05
COL4A5P29400 MTCO3P30-201ENST00000426425 670 ntBASIC2.26□□□□□ -2.05
COL4A5P29400 AL392003.1-201ENST00000434394 243 ntBASIC2.26□□□□□ -2.05
COL4A5P29400 AL590762.3-201ENST00000436372 640 ntBASIC2.26□□□□□ -2.05
COL4A5P29400 AL451074.3-201ENST00000437709 472 ntBASIC2.26□□□□□ -2.05
COL4A5P29400 RPS7P5-201ENST00000441482 581 ntBASIC2.26□□□□□ -2.05
COL4A5P29400 AL353898.1-201ENST00000444055 238 ntBASIC2.26□□□□□ -2.05
COL4A5P29400 AC023512.1-201ENST00000444513 499 ntBASIC2.26□□□□□ -2.05
COL4A5P29400 RPL34P26-201ENST00000445636 354 ntBASIC2.26□□□□□ -2.05
COL4A5P29400 AC146507.1-201ENST00000468335 354 ntBASIC2.26□□□□□ -2.05
COL4A5P29400 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.26□□□□□ -2.05
COL4A5P29400 OR4T1P-201ENST00000554933 911 ntBASIC2.26□□□□□ -2.05
COL4A5P29400 CENPUP2-201ENST00000555897 1186 ntBASIC2.26□□□□□ -2.05
COL4A5P29400 AC067805.1-201ENST00000559344 470 ntBASIC2.26□□□□□ -2.05
COL4A5P29400 MIR4506-201ENST00000584693 77 ntBASIC2.26□□□□□ -2.05
COL4A5P29400 AL356280.1-201ENST00000603614 379 ntBASIC2.26□□□□□ -2.05
COL4A5P29400 HMGB1P51-201ENST00000605166 638 ntBASIC2.26□□□□□ -2.05
COL4A5P29400 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.26□□□□□ -2.05
COL4A5P29400 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.26□□□□□ -2.05
COL4A5P29400 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
COL4A5P29400 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
COL4A5P29400 HSPE1P26-201ENST00000405341 275 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 RNU2-17P-201ENST00000410290 190 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 RPL26P37-201ENST00000411983 438 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 MOB1AP2-201ENST00000446060 614 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 RPL23AP20-201ENST00000447965 421 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 AC104435.1-201ENST00000483483 166 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.25□□□□□ -2.05
COL4A5P29400 AC021146.7-201ENST00000509604 775 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 OR5H4P-201ENST00000510851 923 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.25□□□□□ -2.05
COL4A5P29400 SNORA25.15-201ENST00000516487 89 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 AP004242.1-201ENST00000533701 349 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.25□□□□□ -2.05
COL4A5P29400 AC010297.1-201ENST00000623948 149 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.25□□□□□ -2.05
COL4A5P29400 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.25□□□□□ -2.05
COL4A5P29400 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
COL4A5P29400 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
COL4A5P29400 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
COL4A5P29400 MIR153-1-201ENST00000384914 90 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 RNU6-564P-201ENST00000410983 104 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.25□□□□□ -2.05
COL4A5P29400 ARF4P2-201ENST00000430209 526 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 AC129850.1-201ENST00000436203 508 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 YWHAZP7-201ENST00000436906 631 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.25□□□□□ -2.05
COL4A5P29400 AC009238.1-201ENST00000442165 424 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.25□□□□□ -2.05
COL4A5P29400 AC009237.6-201ENST00000446969 424 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 AL627224.1-201ENST00000448334 444 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 SNX5P1-201ENST00000505757 1041 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
COL4A5P29400 OR4V1P-201ENST00000525394 1140 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 AP000790.1-201ENST00000528891 737 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 PTP4A1P6-201ENST00000531034 478 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.25□□□□□ -2.05
COL4A5P29400 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.25□□□□□ -2.05
COL4A5P29400 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.25□□□□□ -2.05
COL4A5P29400 MTND4LP24-201ENST00000572277 291 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 AL356575.1-201ENST00000603008 283 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 RNA5SP108-201ENST00000605921 117 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 AC105429.2-201ENST00000610567 517 ntBASIC2.25□□□□□ -2.05
COL4A5P29400 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.25□□□□□ -2.05
COL4A5P29400 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
COL4A5P29400 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
COL4A5P29400 AC006378.2-201ENST00000623178 2476 ntBASIC2.24□□□□□ -2.05
COL4A5P29400 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
COL4A5P29400 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.24□□□□□ -2.05
COL4A5P29400 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
COL4A5P29400 HMGB1P10-201ENST00000395823 563 ntBASIC2.24□□□□□ -2.05
COL4A5P29400 U3.37-201ENST00000408528 213 ntBASIC2.24□□□□□ -2.05
COL4A5P29400 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.24□□□□□ -2.05
COL4A5P29400 RPS15AP12-201ENST00000419498 388 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms