Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 ST13P20-201ENST00000447996 1065 ntBASIC2□□□□□ -2.09
HLA-DMBP28068 MTND2P6-201ENST00000455337 1030 ntBASIC2□□□□□ -2.09
HLA-DMBP28068 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2□□□□□ -2.09
HLA-DMBP28068 RPS20P24-201ENST00000457473 361 ntBASIC2□□□□□ -2.09
HLA-DMBP28068 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2□□□□□ -2.09
HLA-DMBP28068 CBX3P3-201ENST00000508108 532 ntBASIC2□□□□□ -2.09
HLA-DMBP28068 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2□□□□□ -2.09
HLA-DMBP28068 RN7SKP132-201ENST00000516001 208 ntBASIC2□□□□□ -2.09
HLA-DMBP28068 RPPH1-2P-201ENST00000516688 293 ntBASIC2□□□□□ -2.09
HLA-DMBP28068 AC103833.1-201ENST00000517442 172 ntBASIC2□□□□□ -2.09
HLA-DMBP28068 CKS1BP7-201ENST00000522230 235 ntBASIC2□□□□□ -2.09
HLA-DMBP28068 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2□□□□□ -2.09
HLA-DMBP28068 OR10V3P-201ENST00000525712 725 ntBASIC2□□□□□ -2.09
HLA-DMBP28068 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2□□□□□ -2.09
HLA-DMBP28068 OR7K1P-201ENST00000546439 926 ntBASIC2□□□□□ -2.09
HLA-DMBP28068 AC128657.1-201ENST00000549459 145 ntBASIC2□□□□□ -2.09
HLA-DMBP28068 AC233266.2-201ENST00000567067 528 ntBASIC2□□□□□ -2.09
HLA-DMBP28068 HMGB1P6-201ENST00000569046 646 ntBASIC2□□□□□ -2.09
HLA-DMBP28068 MIR4513-201ENST00000581077 86 ntBASIC2□□□□□ -2.09
HLA-DMBP28068 ZNF271P-202ENST00000465539 1970 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DMBP28068 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DMBP28068 MIR6073-201ENST00000352083 89 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 RNU6-1005P-201ENST00000384519 107 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 MIR196B-201ENST00000384852 84 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 MIR493-201ENST00000385254 89 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 U3.29-201ENST00000391296 212 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.99□□□□□ -2.09
HLA-DMBP28068 AL136372.1-201ENST00000403060 228 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 SNORA11.2-201ENST00000408318 127 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 RNU2-25P-201ENST00000411041 191 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-DMBP28068 AL009174.1-201ENST00000426577 416 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 AC063976.3-201ENST00000426849 329 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 MTND5P8-201ENST00000449817 1083 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 AC234775.1-201ENST00000454247 670 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 snoU109.4-201ENST00000458953 143 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 AC117522.3-201ENST00000507974 584 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 SETP12-201ENST00000514068 805 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 AC103783.1-201ENST00000520506 373 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 IGJP1-201ENST00000522682 475 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 AP003102.1-201ENST00000525638 661 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 AP000790.1-201ENST00000528891 737 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 RGS4-209ENST00000531057 544 ntTSL 4 BASIC1.99□□□□□ -2.09
HLA-DMBP28068 AC123904.3-201ENST00000547218 814 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DMBP28068 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-DMBP28068 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC1.99□□□□□ -2.09
HLA-DMBP28068 AC009163.5-201ENST00000575421 637 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 MIR4446-201ENST00000578505 67 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.99□□□□□ -2.09
HLA-DMBP28068 AC010620.2-201ENST00000600135 313 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 U73023.1-201ENST00000603134 700 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 AC055876.5-201ENST00000605667 259 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 AC245100.7-201ENST00000609678 442 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 AC096586.1-201ENST00000610267 561 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 BX664608.1-201ENST00000610519 487 ntBASIC1.99□□□□□ -2.09
HLA-DMBP28068 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-DMBP28068 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-DMBP28068 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DMBP28068 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DMBP28068 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.99□□□□□ -2.09
HLA-DMBP28068 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DMBP28068 AL512283.1-201ENST00000606756 1384 ntBASIC1.98□□□□□ -2.09
HLA-DMBP28068 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DMBP28068 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DMBP28068 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC1.98□□□□□ -2.09
HLA-DMBP28068 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DMBP28068 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DMBP28068 USP9YP20-201ENST00000419224 558 ntBASIC1.98□□□□□ -2.09
HLA-DMBP28068 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DMBP28068 RPL7P30-201ENST00000420888 709 ntBASIC1.98□□□□□ -2.09
HLA-DMBP28068 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC1.98□□□□□ -2.09
HLA-DMBP28068 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.98□□□□□ -2.09
HLA-DMBP28068 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.98□□□□□ -2.09
HLA-DMBP28068 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.98□□□□□ -2.09
HLA-DMBP28068 AL590762.3-201ENST00000436372 640 ntBASIC1.98□□□□□ -2.09
HLA-DMBP28068 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DMBP28068 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DMBP28068 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DMBP28068 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.98□□□□□ -2.09
HLA-DMBP28068 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.98□□□□□ -2.09
HLA-DMBP28068 TRBV26-201ENST00000456572 344 ntBASIC1.98□□□□□ -2.09
HLA-DMBP28068 SNORD109B-201ENST00000458961 67 ntBASIC1.98□□□□□ -2.09
HLA-DMBP28068 SNORD109A-201ENST00000459128 67 ntBASIC1.98□□□□□ -2.09
HLA-DMBP28068 AC133134.1-201ENST00000466800 359 ntBASIC1.98□□□□□ -2.09
HLA-DMBP28068 AC010625.1-201ENST00000511296 403 ntBASIC1.98□□□□□ -2.09
HLA-DMBP28068 RAC1P5-201ENST00000512182 576 ntBASIC1.98□□□□□ -2.09
HLA-DMBP28068 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.98□□□□□ -2.09
HLA-DMBP28068 SNORA31.21-201ENST00000517180 77 ntBASIC1.98□□□□□ -2.09
HLA-DMBP28068 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.98□□□□□ -2.09
HLA-DMBP28068 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DMBP28068 EEF1B2P4-201ENST00000551398 348 ntBASIC1.98□□□□□ -2.09
HLA-DMBP28068 LSM6P2-201ENST00000552208 177 ntBASIC1.98□□□□□ -2.09
HLA-DMBP28068 AC095057.3-201ENST00000567102 1157 ntBASIC1.98□□□□□ -2.09
HLA-DMBP28068 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.98□□□□□ -2.09
HLA-DMBP28068 RPL23AP78-201ENST00000599928 470 ntBASIC1.98□□□□□ -2.09
HLA-DMBP28068 AC104237.2-201ENST00000612456 443 ntBASIC1.98□□□□□ -2.09
HLA-DMBP28068 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms