Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 SNORA48.5-201ENST00000391143 135 ntBASIC4.37□□□□□ -1.71
POLR2AP24928 RNU6-876P-201ENST00000391295 104 ntBASIC4.37□□□□□ -1.71
POLR2AP24928 AL590004.1-201ENST00000405321 300 ntBASIC4.37□□□□□ -1.71
POLR2AP24928 RN7SKP222-201ENST00000410651 315 ntBASIC4.37□□□□□ -1.71
POLR2AP24928 USP9YP13-201ENST00000417797 480 ntBASIC4.37□□□□□ -1.71
POLR2AP24928 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.37□□□□□ -1.71
POLR2AP24928 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.37□□□□□ -1.71
POLR2AP24928 DYNLL1P7-201ENST00000429273 258 ntBASIC4.37□□□□□ -1.71
POLR2AP24928 AC087650.1-201ENST00000431445 468 ntBASIC4.37□□□□□ -1.71
POLR2AP24928 RPS26P30-201ENST00000443431 335 ntBASIC4.37□□□□□ -1.71
POLR2AP24928 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
POLR2AP24928 AC114797.1-201ENST00000514003 728 ntBASIC4.37□□□□□ -1.71
POLR2AP24928 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.37□□□□□ -1.71
POLR2AP24928 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.37□□□□□ -1.71
POLR2AP24928 IGLV3-26-201ENST00000520756 302 ntBASIC4.37□□□□□ -1.71
POLR2AP24928 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.37□□□□□ -1.71
POLR2AP24928 AL512360.1-201ENST00000555346 234 ntBASIC4.37□□□□□ -1.71
POLR2AP24928 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.37□□□□□ -1.71
POLR2AP24928 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.37□□□□□ -1.71
POLR2AP24928 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.37□□□□□ -1.71
POLR2AP24928 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.37□□□□□ -1.71
POLR2AP24928 AP004247.3-201ENST00000608682 624 ntBASIC4.37□□□□□ -1.71
POLR2AP24928 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.37□□□□□ -1.71
POLR2AP24928 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
POLR2AP24928 AC093849.1-201ENST00000563631 2209 ntBASIC4.37□□□□□ -1.71
POLR2AP24928 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
POLR2AP24928 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.37□□□□□ -1.71
POLR2AP24928 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
POLR2AP24928 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.37□□□□□ -1.71
POLR2AP24928 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
POLR2AP24928 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
POLR2AP24928 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
POLR2AP24928 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
POLR2AP24928 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
POLR2AP24928 AC093535.2-201ENST00000624769 2326 ntBASIC4.37□□□□□ -1.71
POLR2AP24928 Y_RNA.157-201ENST00000363638 102 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 RNU6-730P-201ENST00000383954 104 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 RNU6-332P-201ENST00000391193 108 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.36□□□□□ -1.71
POLR2AP24928 AL603766.1-201ENST00000407763 664 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 RNA5SP118-201ENST00000410385 109 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 RPS20P15-201ENST00000412792 311 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 AL353777.1-201ENST00000425552 326 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 HMGN2P27-201ENST00000427352 270 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 AL035551.1-201ENST00000446931 348 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 RPL7P59-201ENST00000447700 943 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 MTCO1P42-201ENST00000457379 726 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 AC092989.1-201ENST00000481235 277 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 RPL36AP51-201ENST00000487216 318 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 RAC1P2-201ENST00000511164 579 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
POLR2AP24928 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
POLR2AP24928 AC008562.1-201ENST00000521763 330 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 MIR3671-201ENST00000580455 88 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.36□□□□□ -1.71
POLR2AP24928 BBIP1P1-201ENST00000602999 279 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 AC021646.1-201ENST00000605469 484 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 AC055876.5-201ENST00000605667 259 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 AC009159.1-201ENST00000618386 642 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 HSPA8P17-201ENST00000427029 1382 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
POLR2AP24928 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.36□□□□□ -1.71
POLR2AP24928 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
POLR2AP24928 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
POLR2AP24928 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.36□□□□□ -1.71
POLR2AP24928 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
POLR2AP24928 SNORA63-201ENST00000363450 132 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 RNU6-666P-201ENST00000363499 107 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 RNU6-1085P-201ENST00000363576 107 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 Y_RNA.263-201ENST00000364659 114 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 Y_RNA.326-201ENST00000365176 113 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 Y_RNA.509-201ENST00000384506 99 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 MIR1-2-201ENST00000384961 85 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 MIR320C1-201ENST00000408566 88 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 SNORA3C-201ENST00000408792 125 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.36□□□□□ -1.71
POLR2AP24928 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.36□□□□□ -1.71
POLR2AP24928 HMGB3P12-201ENST00000438745 556 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 AL136380.1-201ENST00000447970 162 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 RPS20P24-201ENST00000457473 361 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 AC092757.1-201ENST00000467293 467 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.36□□□□□ -1.71
POLR2AP24928 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.36□□□□□ -1.71
POLR2AP24928 AC006390.1-201ENST00000508068 283 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.36□□□□□ -1.71
POLR2AP24928 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.36□□□□□ -1.71
POLR2AP24928 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.36□□□□□ -1.71
POLR2AP24928 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.36□□□□□ -1.71
POLR2AP24928 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.36□□□□□ -1.71
POLR2AP24928 AC022031.1-201ENST00000585985 2593 ntBASIC4.36□□□□□ -1.71
POLR2AP24928 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
POLR2AP24928 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.36□□□□□ -1.71
POLR2AP24928 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
POLR2AP24928 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
POLR2AP24928 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
POLR2AP24928 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
POLR2AP24928 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.35□□□□□ -1.71
POLR2AP24928 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.35□□□□□ -1.71
POLR2AP24928 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
POLR2AP24928 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms