Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC022726.1-201ENST00000587475 207 ntBASIC5.58□□□□□ -1.52
ERCC3P19447 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.58□□□□□ -1.52
ERCC3P19447 SDR42E1P2-201ENST00000614861 481 ntBASIC5.58□□□□□ -1.52
ERCC3P19447 AC010133.1-201ENST00000615809 842 ntBASIC5.58□□□□□ -1.52
ERCC3P19447 AL022401.1-201ENST00000619498 108 ntBASIC5.58□□□□□ -1.52
ERCC3P19447 AC015871.5-202ENST00000623252 701 ntBASIC5.58□□□□□ -1.52
ERCC3P19447 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.58□□□□□ -1.52
ERCC3P19447 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.58□□□□□ -1.52
ERCC3P19447 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC3P19447 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
ERCC3P19447 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC3P19447 AC139769.1-204ENST00000472297 1931 ntBASIC5.58□□□□□ -1.52
ERCC3P19447 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
ERCC3P19447 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
ERCC3P19447 MUC2-202ENST00000613187 4845 ntBASIC5.58□□□□□ -1.52
ERCC3P19447 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
ERCC3P19447 AC090337.1-201ENST00000579651 2074 ntBASIC5.57□□□□□ -1.52
ERCC3P19447 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
ERCC3P19447 RNU6-552P-201ENST00000362869 119 ntBASIC5.57□□□□□ -1.52
ERCC3P19447 RNU6-335P-201ENST00000364563 113 ntBASIC5.57□□□□□ -1.52
ERCC3P19447 RNU6-946P-201ENST00000383878 107 ntBASIC5.57□□□□□ -1.52
ERCC3P19447 RNU6-76P-201ENST00000384060 104 ntBASIC5.57□□□□□ -1.52
ERCC3P19447 MIR708-201ENST00000390708 88 ntBASIC5.57□□□□□ -1.52
ERCC3P19447 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ERCC3P19447 AL162578.1-201ENST00000406202 378 ntBASIC5.57□□□□□ -1.52
ERCC3P19447 RNA5SP345-201ENST00000410646 108 ntBASIC5.57□□□□□ -1.52
ERCC3P19447 OR6C66P-201ENST00000414917 930 ntBASIC5.57□□□□□ -1.52
ERCC3P19447 DUTP6-201ENST00000425573 462 ntBASIC5.57□□□□□ -1.52
ERCC3P19447 RPL7L1P10-201ENST00000427790 463 ntBASIC5.57□□□□□ -1.52
ERCC3P19447 AC016831.4-201ENST00000438302 307 ntBASIC5.57□□□□□ -1.52
ERCC3P19447 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.57□□□□□ -1.52
ERCC3P19447 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.57□□□□□ -1.52
ERCC3P19447 MTND3P16-201ENST00000452205 344 ntBASIC5.57□□□□□ -1.52
ERCC3P19447 SNRPFP3-201ENST00000457792 225 ntBASIC5.57□□□□□ -1.52
ERCC3P19447 RN7SKP219-201ENST00000516825 296 ntBASIC5.57□□□□□ -1.52
ERCC3P19447 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.57□□□□□ -1.52
ERCC3P19447 PSMA2P1-201ENST00000526365 646 ntBASIC5.57□□□□□ -1.52
ERCC3P19447 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.57□□□□□ -1.52
ERCC3P19447 AC243972.3-201ENST00000539655 198 ntBASIC5.57□□□□□ -1.52
ERCC3P19447 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.57□□□□□ -1.52
ERCC3P19447 AL138976.2-201ENST00000563989 694 ntBASIC5.57□□□□□ -1.52
ERCC3P19447 AC018638.8-201ENST00000588755 281 ntBASIC5.57□□□□□ -1.52
ERCC3P19447 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.57□□□□□ -1.52
ERCC3P19447 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.57□□□□□ -1.52
ERCC3P19447 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
ERCC3P19447 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.57□□□□□ -1.52
ERCC3P19447 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ERCC3P19447 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ERCC3P19447 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
ERCC3P19447 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC3P19447 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC3P19447 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.56□□□□□ -1.52
ERCC3P19447 TAB3P1-202ENST00000452645 1634 ntBASIC5.56□□□□□ -1.52
ERCC3P19447 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
ERCC3P19447 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.56□□□□□ -1.52
ERCC3P19447 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC3P19447 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.56□□□□□ -1.52
ERCC3P19447 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC3P19447 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
ERCC3P19447 Y_RNA.72-201ENST00000362894 103 ntBASIC5.56□□□□□ -1.52
ERCC3P19447 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC3P19447 RNU6-1181P-201ENST00000384191 106 ntBASIC5.56□□□□□ -1.52
ERCC3P19447 U3.22-201ENST00000391120 215 ntBASIC5.56□□□□□ -1.52
ERCC3P19447 RNU6-903P-201ENST00000391270 109 ntBASIC5.56□□□□□ -1.52
ERCC3P19447 RNU2-29P-201ENST00000410423 189 ntBASIC5.56□□□□□ -1.52
ERCC3P19447 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.56□□□□□ -1.52
ERCC3P19447 RPL23AP1-201ENST00000428990 471 ntBASIC5.56□□□□□ -1.52
ERCC3P19447 RPL36AP53-201ENST00000432891 316 ntBASIC5.56□□□□□ -1.52
ERCC3P19447 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.56□□□□□ -1.52
ERCC3P19447 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.56□□□□□ -1.52
ERCC3P19447 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC3P19447 RPL7P12-201ENST00000446719 750 ntBASIC5.56□□□□□ -1.52
ERCC3P19447 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.56□□□□□ -1.52
ERCC3P19447 AL645939.1-201ENST00000453429 797 ntBASIC5.56□□□□□ -1.52
ERCC3P19447 RPL38P4-201ENST00000502376 214 ntBASIC5.56□□□□□ -1.52
ERCC3P19447 AC139783.2-201ENST00000504847 1145 ntBASIC5.56□□□□□ -1.52
ERCC3P19447 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC5.56□□□□□ -1.52
ERCC3P19447 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.56□□□□□ -1.52
ERCC3P19447 ERHP1-201ENST00000523006 310 ntBASIC5.56□□□□□ -1.52
ERCC3P19447 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
ERCC3P19447 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.56□□□□□ -1.52
ERCC3P19447 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.56□□□□□ -1.52
ERCC3P19447 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.56□□□□□ -1.52
ERCC3P19447 AC133555.2-201ENST00000550213 292 ntBASIC5.56□□□□□ -1.52
ERCC3P19447 AL049839.1-201ENST00000556151 657 ntBASIC5.56□□□□□ -1.52
ERCC3P19447 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.56□□□□□ -1.52
ERCC3P19447 MIR4703-201ENST00000577728 79 ntBASIC5.56□□□□□ -1.52
ERCC3P19447 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.56□□□□□ -1.52
ERCC3P19447 FGF7P1-201ENST00000582820 288 ntBASIC5.56□□□□□ -1.52
ERCC3P19447 AC091135.1-201ENST00000585943 307 ntBASIC5.56□□□□□ -1.52
ERCC3P19447 AL670379.4-201ENST00000605279 254 ntBASIC5.56□□□□□ -1.52
ERCC3P19447 AC004696.1-201ENST00000614345 607 ntBASIC5.56□□□□□ -1.52
ERCC3P19447 AC011155.2-201ENST00000623202 216 ntBASIC5.56□□□□□ -1.52
ERCC3P19447 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.56□□□□□ -1.52
ERCC3P19447 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC3P19447 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
ERCC3P19447 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ERCC3P19447 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ERCC3P19447 AC100778.3-201ENST00000580060 1750 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms