Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AC078795.3-201ENST00000602913 472 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 AL451044.1-201ENST00000604867 238 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.72□□□□□ -1.65
PTPN1P18031 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.72□□□□□ -1.65
PTPN1P18031 FRG1KP-201ENST00000623592 341 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN1P18031 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN1P18031 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN1P18031 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN1P18031 AL592182.3-201ENST00000642132 3304 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN1P18031 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.72□□□□□ -1.65
PTPN1P18031 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN1P18031 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.72□□□□□ -1.65
PTPN1P18031 MAPK10-303ENST00000641324 3959 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
PTPN1P18031 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.71□□□□□ -1.66
PTPN1P18031 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN1P18031 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.71□□□□□ -1.66
PTPN1P18031 OR5P1P-201ENST00000299512 925 ntBASIC4.71□□□□□ -1.66
PTPN1P18031 SNORD51-201ENST00000384320 80 ntBASIC4.71□□□□□ -1.66
PTPN1P18031 MIR558-201ENST00000384920 94 ntBASIC4.71□□□□□ -1.66
PTPN1P18031 RAB28P1-201ENST00000411517 641 ntBASIC4.71□□□□□ -1.66
PTPN1P18031 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.71□□□□□ -1.66
PTPN1P18031 RPS29P17-201ENST00000430795 166 ntBASIC4.71□□□□□ -1.66
PTPN1P18031 RPL23AP25-201ENST00000430973 463 ntBASIC4.71□□□□□ -1.66
PTPN1P18031 RPL12P46-201ENST00000436610 195 ntBASIC4.71□□□□□ -1.66
PTPN1P18031 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.71□□□□□ -1.66
PTPN1P18031 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.71□□□□□ -1.66
PTPN1P18031 AC007677.1-201ENST00000445757 515 ntBASIC4.71□□□□□ -1.66
PTPN1P18031 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.71□□□□□ -1.66
PTPN1P18031 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN1P18031 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN1P18031 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.71□□□□□ -1.66
PTPN1P18031 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN1P18031 HMGN1P13-201ENST00000505795 138 ntBASIC4.71□□□□□ -1.66
PTPN1P18031 AC093840.1-201ENST00000511599 336 ntBASIC4.71□□□□□ -1.66
PTPN1P18031 AC005798.1-201ENST00000513715 387 ntBASIC4.71□□□□□ -1.66
PTPN1P18031 AC105417.1-201ENST00000514691 285 ntBASIC4.71□□□□□ -1.66
PTPN1P18031 AC105029.1-201ENST00000520250 669 ntBASIC4.71□□□□□ -1.66
PTPN1P18031 PSMA2P1-201ENST00000526365 646 ntBASIC4.71□□□□□ -1.66
PTPN1P18031 AC093027.1-201ENST00000546698 429 ntBASIC4.71□□□□□ -1.66
PTPN1P18031 AC011611.1-201ENST00000552179 197 ntBASIC4.71□□□□□ -1.66
PTPN1P18031 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN1P18031 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.71□□□□□ -1.66
PTPN1P18031 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.71□□□□□ -1.66
PTPN1P18031 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.71□□□□□ -1.66
PTPN1P18031 AL121992.2-201ENST00000606262 256 ntBASIC4.71□□□□□ -1.66
PTPN1P18031 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.71□□□□□ -1.66
PTPN1P18031 AC130324.3-201ENST00000614165 542 ntBASIC4.71□□□□□ -1.66
PTPN1P18031 AC009248.2-201ENST00000619826 254 ntBASIC4.71□□□□□ -1.66
PTPN1P18031 AC090617.10-201ENST00000624308 134 ntBASIC4.71□□□□□ -1.66
PTPN1P18031 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.71□□□□□ -1.66
PTPN1P18031 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.71□□□□□ -1.66
PTPN1P18031 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
PTPN1P18031 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PTPN1P18031 AC009951.1-201ENST00000623674 2614 ntBASIC4.71□□□□□ -1.66
PTPN1P18031 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN1P18031 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
PTPN1P18031 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN1P18031 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN1P18031 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN1P18031 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.7□□□□□ -1.66
PTPN1P18031 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.7□□□□□ -1.66
PTPN1P18031 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN1P18031 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.7□□□□□ -1.66
PTPN1P18031 RNA5SP509-201ENST00000364577 119 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 RNU6-339P-201ENST00000384310 107 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 MIR454-201ENST00000390180 115 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 RNU6-510P-201ENST00000391239 108 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN1P18031 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN1P18031 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.7□□□□□ -1.66
PTPN1P18031 MTCYBP8-201ENST00000422855 651 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 MED13P1-201ENST00000428342 171 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 C4BPAP2-201ENST00000428434 478 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 AC008065.1-201ENST00000428525 348 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN1P18031 PHBP16-201ENST00000446318 950 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 MRPL50P4-201ENST00000446432 475 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 RNU7-59P-201ENST00000459101 61 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 RN7SL98P-201ENST00000462271 300 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 MTCO3P9-201ENST00000506989 781 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 RNU6-798P-201ENST00000516912 103 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN1P18031 AP000857.1-201ENST00000532151 543 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.7□□□□□ -1.66
PTPN1P18031 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN1P18031 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.7□□□□□ -1.66
PTPN1P18031 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.7□□□□□ -1.66
PTPN1P18031 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN1P18031 AC243960.4-201ENST00000600532 288 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 AC079587.1-201ENST00000603846 277 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 AC010591.1-201ENST00000603941 649 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 AC005034.5-201ENST00000604219 466 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 uc_338.5-201ENST00000611839 155 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 AC093913.1-201ENST00000614178 329 ntBASIC4.7□□□□□ -1.66
PTPN1P18031 MIR6758-201ENST00000620653 63 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms