Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
NID1P14543 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NID1P14543 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NID1P14543 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NID1P14543 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
NID1P14543 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
NID1P14543 AC068870.1-201ENST00000563737 2455 ntBASIC5.17□□□□□ -1.58
NID1P14543 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NID1P14543 AC104964.3-201ENST00000606115 2860 ntBASIC5.17□□□□□ -1.58
NID1P14543 AC092681.1-201ENST00000297369 291 ntBASIC5.17□□□□□ -1.58
NID1P14543 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NID1P14543 RNU1-76P-201ENST00000362903 159 ntBASIC5.17□□□□□ -1.58
NID1P14543 RNU6-1243P-201ENST00000364028 107 ntBASIC5.17□□□□□ -1.58
NID1P14543 RNU6-740P-201ENST00000364734 105 ntBASIC5.17□□□□□ -1.58
NID1P14543 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NID1P14543 MIR613-201ENST00000385248 95 ntBASIC5.17□□□□□ -1.58
NID1P14543 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NID1P14543 RNU6-754P-201ENST00000391166 107 ntBASIC5.17□□□□□ -1.58
NID1P14543 AL391361.1-201ENST00000405580 489 ntBASIC5.17□□□□□ -1.58
NID1P14543 RNU6-130P-201ENST00000411112 103 ntBASIC5.17□□□□□ -1.58
NID1P14543 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.17□□□□□ -1.58
NID1P14543 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.17□□□□□ -1.58
NID1P14543 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.17□□□□□ -1.58
NID1P14543 RPS12P5-201ENST00000423449 371 ntBASIC5.17□□□□□ -1.58
NID1P14543 RPL23AP25-201ENST00000430973 463 ntBASIC5.17□□□□□ -1.58
NID1P14543 SETP5-201ENST00000437270 562 ntBASIC5.17□□□□□ -1.58
NID1P14543 AC127537.2-201ENST00000439258 465 ntBASIC5.17□□□□□ -1.58
NID1P14543 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.17□□□□□ -1.58
NID1P14543 SNRPCP3-201ENST00000474888 476 ntBASIC5.17□□□□□ -1.58
NID1P14543 RPS29P26-201ENST00000477483 171 ntBASIC5.17□□□□□ -1.58
NID1P14543 AC004453.1-201ENST00000487895 408 ntBASIC5.17□□□□□ -1.58
NID1P14543 ACA59.1-201ENST00000515966 143 ntBASIC5.17□□□□□ -1.58
NID1P14543 Y_RNA.683-201ENST00000516508 93 ntBASIC5.17□□□□□ -1.58
NID1P14543 AC087441.2-201ENST00000529141 262 ntBASIC5.17□□□□□ -1.58
NID1P14543 AC126177.3-201ENST00000551839 688 ntBASIC5.17□□□□□ -1.58
NID1P14543 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.17□□□□□ -1.58
NID1P14543 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.17□□□□□ -1.58
NID1P14543 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.17□□□□□ -1.58
NID1P14543 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.17□□□□□ -1.58
NID1P14543 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.17□□□□□ -1.58
NID1P14543 AL139124.1-201ENST00000609123 421 ntBASIC5.17□□□□□ -1.58
NID1P14543 AL591516.1-201ENST00000611326 274 ntBASIC5.17□□□□□ -1.58
NID1P14543 RNA5SP440-201ENST00000612665 119 ntBASIC5.17□□□□□ -1.58
NID1P14543 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.17□□□□□ -1.58
NID1P14543 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.17□□□□□ -1.58
NID1P14543 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NID1P14543 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
NID1P14543 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NID1P14543 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
NID1P14543 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.17□□□□□ -1.58
NID1P14543 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NID1P14543 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NID1P14543 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NID1P14543 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NID1P14543 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NID1P14543 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NID1P14543 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.17□□□□□ -1.58
NID1P14543 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.17□□□□□ -1.58
NID1P14543 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NID1P14543 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
NID1P14543 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
NID1P14543 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NID1P14543 HSPA8P1-201ENST00000425843 1833 ntBASIC5.16□□□□□ -1.58
NID1P14543 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NID1P14543 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NID1P14543 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.16□□□□□ -1.58
NID1P14543 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
NID1P14543 RNU6-1266P-201ENST00000362794 105 ntBASIC5.16□□□□□ -1.58
NID1P14543 RNU6-637P-201ENST00000384050 107 ntBASIC5.16□□□□□ -1.58
NID1P14543 Y_RNA.480-201ENST00000384364 102 ntBASIC5.16□□□□□ -1.58
NID1P14543 MIR215-201ENST00000384858 110 ntBASIC5.16□□□□□ -1.58
NID1P14543 BMS1P17-202ENST00000416720 316 ntBASIC5.16□□□□□ -1.58
NID1P14543 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC5.16□□□□□ -1.58
NID1P14543 EIF4EP2-201ENST00000422816 654 ntBASIC5.16□□□□□ -1.58
NID1P14543 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.16□□□□□ -1.58
NID1P14543 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NID1P14543 RNU6-1218P-201ENST00000458990 108 ntBASIC5.16□□□□□ -1.58
NID1P14543 RN7SL188P-201ENST00000469842 285 ntBASIC5.16□□□□□ -1.58
NID1P14543 RPL31P60-201ENST00000478450 367 ntBASIC5.16□□□□□ -1.58
NID1P14543 AC107393.1-201ENST00000512403 346 ntBASIC5.16□□□□□ -1.58
NID1P14543 RNU6-1278P-201ENST00000516130 107 ntBASIC5.16□□□□□ -1.58
NID1P14543 RN7SKP82-201ENST00000516786 223 ntBASIC5.16□□□□□ -1.58
NID1P14543 AC069113.1-201ENST00000517763 267 ntBASIC5.16□□□□□ -1.58
NID1P14543 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.16□□□□□ -1.58
NID1P14543 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NID1P14543 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.16□□□□□ -1.58
NID1P14543 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.16□□□□□ -1.58
NID1P14543 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.16□□□□□ -1.58
NID1P14543 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.16□□□□□ -1.58
NID1P14543 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.16□□□□□ -1.58
NID1P14543 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.16□□□□□ -1.58
NID1P14543 MIR6133-201ENST00000617057 108 ntBASIC5.16□□□□□ -1.58
NID1P14543 RNA5SP439-201ENST00000617595 124 ntBASIC5.16□□□□□ -1.58
NID1P14543 AC007998.5-201ENST00000622938 237 ntBASIC5.16□□□□□ -1.58
NID1P14543 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.16□□□□□ -1.58
NID1P14543 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.16□□□□□ -1.58
NID1P14543 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.16□□□□□ -1.58
NID1P14543 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.16□□□□□ -1.58
NID1P14543 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
NID1P14543 AC006206.1-201ENST00000544842 3387 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms