Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RPL37P6-202ENST00000464216 403 ntBASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 AC053481.1-201ENST00000467217 306 ntBASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 AC011276.1-201ENST00000469688 323 ntBASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 AP005902.1-201ENST00000521358 186 ntBASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 AP000889.2-201ENST00000532684 490 ntBASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 BNIP3P5-201ENST00000562290 498 ntBASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 MIR6716-201ENST00000613413 80 ntBASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 MIR4496-201ENST00000635896 61 ntBASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.4□□□□□ -1.38
CSB-PGBD3P0DP91 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CSB-PGBD3P0DP91 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
CSB-PGBD3P0DP91 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 Y_RNA.158-201ENST00000363651 101 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 AC117470.1-201ENST00000381974 330 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 SNORD51-201ENST00000384320 80 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 MT-TC-201ENST00000387405 66 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 U3.32-201ENST00000408116 212 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 RNU6-193P-201ENST00000410977 107 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 HMGN1P24-201ENST00000412282 298 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 RPL31P12-201ENST00000422587 358 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 HMGB3P11-201ENST00000440127 604 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 AL162591.2-201ENST00000449634 317 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 AL049714.1-201ENST00000466686 347 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 GMFBP1-201ENST00000467831 427 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 AC004062.1-201ENST00000509926 645 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 AC107222.1-201ENST00000510899 637 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 RNU1-6P-201ENST00000516290 144 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 AC134698.5-201ENST00000519444 336 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 AC136777.2-201ENST00000522979 358 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 AP001804.3-201ENST00000525146 880 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 MYL12BP1-201ENST00000569826 507 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 RN7SL652P-201ENST00000577769 300 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 MIR5699-201ENST00000578903 90 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 MIR3939-201ENST00000582614 106 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 MIR3942-201ENST00000585264 109 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 AC006329.2-201ENST00000611491 394 ntBASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CSB-PGBD3P0DP91 AL138713.1-201ENST00000624026 2130 ntBASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 OR56B2P-202ENST00000641377 2453 ntBASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 RNU6-379P-201ENST00000363813 104 ntBASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 RNU6-522P-201ENST00000364497 107 ntBASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 MIR548K-201ENST00000408406 116 ntBASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 RPS12P5-201ENST00000423449 371 ntBASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 RPL21P89-201ENST00000444021 467 ntBASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 HMGB3P21-201ENST00000452483 547 ntBASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 AL162395.1-201ENST00000457882 422 ntBASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 RPS17P2-201ENST00000461663 408 ntBASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 AC091153.1-201ENST00000466297 402 ntBASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 RPL21P99-201ENST00000480369 423 ntBASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 AC083904.1-201ENST00000487828 231 ntBASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 RNU6-864P-201ENST00000516256 108 ntBASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 RNU6-764P-201ENST00000516396 105 ntBASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 RANP9-201ENST00000519957 271 ntBASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 AP001781.1-201ENST00000530977 207 ntBASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 AC084783.1-201ENST00000565846 910 ntBASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 AC105224.1-201ENST00000587055 421 ntBASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 GLUD1P4-201ENST00000590914 418 ntBASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 AC011944.2-201ENST00000624440 683 ntBASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CSB-PGBD3P0DP91 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms