Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RB1P06400 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RB1P06400 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.79□□□□□ -1.8
RB1P06400 RNU6-1074P-201ENST00000383995 104 ntBASIC3.79□□□□□ -1.8
RB1P06400 RNU5A-2P-201ENST00000384337 116 ntBASIC3.79□□□□□ -1.8
RB1P06400 MTHFD2P2-201ENST00000407725 247 ntBASIC3.79□□□□□ -1.8
RB1P06400 RN7SKP266-201ENST00000410232 287 ntBASIC3.79□□□□□ -1.8
RB1P06400 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.79□□□□□ -1.8
RB1P06400 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.79□□□□□ -1.8
RB1P06400 MTND4P20-201ENST00000424125 869 ntBASIC3.79□□□□□ -1.8
RB1P06400 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.79□□□□□ -1.8
RB1P06400 RPL21P66-201ENST00000426566 466 ntBASIC3.79□□□□□ -1.8
RB1P06400 MTATP6P17-201ENST00000431030 672 ntBASIC3.79□□□□□ -1.8
RB1P06400 AC236972.1-201ENST00000433225 199 ntBASIC3.79□□□□□ -1.8
RB1P06400 UBE2D3P1-201ENST00000436669 444 ntBASIC3.79□□□□□ -1.8
RB1P06400 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
RB1P06400 ART2BP-201ENST00000453501 499 ntBASIC3.79□□□□□ -1.8
RB1P06400 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.79□□□□□ -1.8
RB1P06400 RPL21P104-201ENST00000464143 478 ntBASIC3.79□□□□□ -1.8
RB1P06400 AC096751.1-202ENST00000502691 1067 ntBASIC3.79□□□□□ -1.8
RB1P06400 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.79□□□□□ -1.8
RB1P06400 RN7SKP289-201ENST00000517244 295 ntBASIC3.79□□□□□ -1.8
RB1P06400 AC090136.1-201ENST00000520009 240 ntBASIC3.79□□□□□ -1.8
RB1P06400 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.79□□□□□ -1.8
RB1P06400 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.79□□□□□ -1.8
RB1P06400 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.79□□□□□ -1.8
RB1P06400 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.79□□□□□ -1.8
RB1P06400 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.79□□□□□ -1.8
RB1P06400 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.79□□□□□ -1.8
RB1P06400 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.79□□□□□ -1.8
RB1P06400 AC090425.2-201ENST00000608818 501 ntBASIC3.79□□□□□ -1.8
RB1P06400 AC004223.4-201ENST00000612426 332 ntBASIC3.79□□□□□ -1.8
RB1P06400 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.79□□□□□ -1.8
RB1P06400 U6.98-201ENST00000637157 84 ntBASIC3.79□□□□□ -1.8
RB1P06400 OR6C71P-202ENST00000641886 1107 ntBASIC3.79□□□□□ -1.8
RB1P06400 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.79□□□□□ -1.8
RB1P06400 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RB1P06400 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RB1P06400 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RB1P06400 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.79□□□□□ -1.8
RB1P06400 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RB1P06400 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RB1P06400 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RB1P06400 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RB1P06400 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RB1P06400 RNU6-744P-201ENST00000365557 107 ntBASIC3.78□□□□□ -1.8
RB1P06400 RNU6-1316P-201ENST00000384242 108 ntBASIC3.78□□□□□ -1.8
RB1P06400 Y_RNA.500-201ENST00000384466 111 ntBASIC3.78□□□□□ -1.8
RB1P06400 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RB1P06400 UBA52P6-201ENST00000399822 382 ntBASIC3.78□□□□□ -1.8
RB1P06400 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.78□□□□□ -1.8
RB1P06400 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.78□□□□□ -1.8
RB1P06400 RPS15AP38-201ENST00000413110 372 ntBASIC3.78□□□□□ -1.8
RB1P06400 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.78□□□□□ -1.8
RB1P06400 HMGB3P20-201ENST00000417997 600 ntBASIC3.78□□□□□ -1.8
RB1P06400 DBIP2-201ENST00000419076 262 ntBASIC3.78□□□□□ -1.8
RB1P06400 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.78□□□□□ -1.8
RB1P06400 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.78□□□□□ -1.8
RB1P06400 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.78□□□□□ -1.8
RB1P06400 AC006028.1-201ENST00000438379 402 ntBASIC3.78□□□□□ -1.8
RB1P06400 OR6K5P-201ENST00000447050 945 ntBASIC3.78□□□□□ -1.8
RB1P06400 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.78□□□□□ -1.8
RB1P06400 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.78□□□□□ -1.8
RB1P06400 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.78□□□□□ -1.8
RB1P06400 AC023598.1-201ENST00000472521 361 ntBASIC3.78□□□□□ -1.8
RB1P06400 AC069499.1-201ENST00000489433 509 ntBASIC3.78□□□□□ -1.8
RB1P06400 MTND1P22-201ENST00000510572 951 ntBASIC3.78□□□□□ -1.8
RB1P06400 AC010342.1-201ENST00000514047 877 ntBASIC3.78□□□□□ -1.8
RB1P06400 MRPS36P5-201ENST00000551909 298 ntBASIC3.78□□□□□ -1.8
RB1P06400 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.78□□□□□ -1.8
RB1P06400 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.78□□□□□ -1.8
RB1P06400 AC090616.2-202ENST00000584248 222 ntBASIC3.78□□□□□ -1.8
RB1P06400 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.78□□□□□ -1.8
RB1P06400 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RB1P06400 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.78□□□□□ -1.8
RB1P06400 HSPA8P1-201ENST00000425843 1833 ntBASIC3.78□□□□□ -1.8
RB1P06400 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RB1P06400 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RB1P06400 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RB1P06400 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RB1P06400 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RB1P06400 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RB1P06400 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RB1P06400 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
RB1P06400 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RB1P06400 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.77□□□□□ -1.81
RB1P06400 AL122016.1-201ENST00000403365 367 ntBASIC3.77□□□□□ -1.81
RB1P06400 RPL23AP39-201ENST00000415533 405 ntBASIC3.77□□□□□ -1.81
RB1P06400 AC234781.2-201ENST00000426370 994 ntBASIC3.77□□□□□ -1.81
RB1P06400 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.77□□□□□ -1.81
RB1P06400 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.77□□□□□ -1.81
RB1P06400 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.77□□□□□ -1.81
RB1P06400 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.77□□□□□ -1.81
RB1P06400 HMGB1P12-201ENST00000438594 598 ntBASIC3.77□□□□□ -1.81
RB1P06400 LSM1P1-201ENST00000438629 273 ntBASIC3.77□□□□□ -1.81
RB1P06400 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.77□□□□□ -1.81
RB1P06400 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.77□□□□□ -1.81
RB1P06400 AC072039.1-201ENST00000477611 581 ntBASIC3.77□□□□□ -1.81
RB1P06400 RPS4XP13-201ENST00000483219 789 ntBASIC3.77□□□□□ -1.81
RB1P06400 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms