Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RNU6-759P-201ENST00000516740 103 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 ERHP1-201ENST00000523006 310 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.14□□□□□ -1.91
MT-ND1P03886 AP001804.3-201ENST00000525146 880 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 AC022690.1-201ENST00000526681 550 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 AC090888.1-201ENST00000561335 1141 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.14□□□□□ -1.91
MT-ND1P03886 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.14□□□□□ -1.91
MT-ND1P03886 ISCA1P3-201ENST00000577104 373 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 MAGOH2P-202ENST00000584384 429 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.14□□□□□ -1.91
MT-ND1P03886 AC024560.3-201ENST00000608482 349 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 AC107294.3-201ENST00000609211 526 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 AC004908.3-201ENST00000610248 625 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 MIR7851-201ENST00000610611 160 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 AC024941.1-201ENST00000612250 334 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 AL356585.4-201ENST00000623078 1229 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 AC231657.1-201ENST00000624313 397 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.14□□□□□ -1.91
MT-ND1P03886 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
MT-ND1P03886 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.14□□□□□ -1.91
MT-ND1P03886 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
MT-ND1P03886 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
MT-ND1P03886 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
MT-ND1P03886 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
MT-ND1P03886 MTND5P27-201ENST00000428871 1720 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 AC090740.1-201ENST00000623193 2262 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.13□□□□□ -1.91
MT-ND1P03886 RNA5SP515-201ENST00000364570 118 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 RPL21P17-201ENST00000397467 475 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 RPS3AP26-201ENST00000398259 784 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 RPS15AP38-201ENST00000413110 372 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.13□□□□□ -1.91
MT-ND1P03886 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
MT-ND1P03886 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MT-ND1P03886 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.13□□□□□ -1.91
MT-ND1P03886 AC009518.2-201ENST00000418056 731 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 AL953862.1-201ENST00000423016 168 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 UBE2D3P2-201ENST00000424409 445 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 PSMA6P3-201ENST00000428242 164 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.13□□□□□ -1.91
MT-ND1P03886 CYCSP4-201ENST00000429682 331 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 MTND1P20-201ENST00000430341 950 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 AC091390.1-201ENST00000433904 331 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.13□□□□□ -1.91
MT-ND1P03886 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MT-ND1P03886 AC004866.2-201ENST00000438285 481 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 AC115115.1-201ENST00000449927 248 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.13□□□□□ -1.91
MT-ND1P03886 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.13□□□□□ -1.91
MT-ND1P03886 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.13□□□□□ -1.91
MT-ND1P03886 AC026410.2-201ENST00000460281 156 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.13□□□□□ -1.91
MT-ND1P03886 AC097493.1-201ENST00000463958 372 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 BET1P1-201ENST00000482276 359 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.13□□□□□ -1.91
MT-ND1P03886 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.13□□□□□ -1.91
MT-ND1P03886 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.13□□□□□ -1.91
MT-ND1P03886 AC093278.1-201ENST00000494700 600 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 AC112198.1-201ENST00000505369 1220 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.13□□□□□ -1.91
MT-ND1P03886 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.13□□□□□ -1.91
MT-ND1P03886 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.13□□□□□ -1.91
MT-ND1P03886 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MT-ND1P03886 OR7K1P-201ENST00000546439 926 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.13□□□□□ -1.91
MT-ND1P03886 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.13□□□□□ -1.91
MT-ND1P03886 TRAV37-201ENST00000553906 342 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.13□□□□□ -1.91
MT-ND1P03886 AC005476.1-201ENST00000554427 397 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 HSPE1P3-201ENST00000559254 309 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.13□□□□□ -1.91
MT-ND1P03886 AC002400.1-201ENST00000569310 726 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.13□□□□□ -1.91
MT-ND1P03886 AC011260.1-201ENST00000578420 472 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.13□□□□□ -1.91
MT-ND1P03886 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.13□□□□□ -1.91
MT-ND1P03886 AC008962.1-201ENST00000605729 304 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 AC002076.2-201ENST00000617362 122 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 AC068831.8-201ENST00000620171 435 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 AC078883.4-201ENST00000623218 367 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 AC079248.2-201ENST00000623779 326 ntBASIC3.13□□□□□ -1.91
MT-ND1P03886 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.13□□□□□ -1.91
MT-ND1P03886 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
MT-ND1P03886 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
MT-ND1P03886 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.12□□□□□ -1.91
MT-ND1P03886 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
MT-ND1P03886 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
MT-ND1P03886 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.12□□□□□ -1.91
MT-ND1P03886 RNU6-433P-201ENST00000363216 104 ntBASIC3.12□□□□□ -1.91
MT-ND1P03886 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.12□□□□□ -1.91
MT-ND1P03886 RNU6-1077P-201ENST00000410506 102 ntBASIC3.12□□□□□ -1.91
MT-ND1P03886 HSFY4P-201ENST00000415994 1181 ntBASIC3.12□□□□□ -1.91
MT-ND1P03886 RPL7P30-201ENST00000420888 709 ntBASIC3.12□□□□□ -1.91
MT-ND1P03886 AC234781.2-201ENST00000426370 994 ntBASIC3.12□□□□□ -1.91
MT-ND1P03886 AL117351.1-201ENST00000438864 766 ntBASIC3.12□□□□□ -1.91
MT-ND1P03886 AC073387.1-201ENST00000453261 709 ntBASIC3.12□□□□□ -1.91
MT-ND1P03886 Z82190.1-201ENST00000454534 490 ntBASIC3.12□□□□□ -1.91
MT-ND1P03886 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms