Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 MTCYBP12-201ENST00000440559 1134 ntBASIC1.6□□□□□ -2.15
SIX6O95475 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.6□□□□□ -2.15
SIX6O95475 AL513321.1-201ENST00000441175 761 ntBASIC1.6□□□□□ -2.15
SIX6O95475 AC108938.1-201ENST00000451204 136 ntBASIC1.6□□□□□ -2.15
SIX6O95475 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.6□□□□□ -2.15
SIX6O95475 RPL7P49-201ENST00000471402 708 ntBASIC1.6□□□□□ -2.15
SIX6O95475 AL135752.1-201ENST00000479477 471 ntBASIC1.6□□□□□ -2.15
SIX6O95475 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC1.6□□□□□ -2.15
SIX6O95475 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC1.6□□□□□ -2.15
SIX6O95475 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.6□□□□□ -2.15
SIX6O95475 IGKV3-31-201ENST00000523109 329 ntBASIC1.6□□□□□ -2.15
SIX6O95475 CYCSP26-201ENST00000534107 320 ntBASIC1.6□□□□□ -2.15
SIX6O95475 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.6□□□□□ -2.15
SIX6O95475 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.6□□□□□ -2.15
SIX6O95475 AC024614.2-201ENST00000577584 372 ntBASIC1.6□□□□□ -2.15
SIX6O95475 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.6□□□□□ -2.15
SIX6O95475 AC022069.1-201ENST00000582910 658 ntBASIC1.6□□□□□ -2.15
SIX6O95475 AL096840.1-201ENST00000603287 93 ntBASIC1.6□□□□□ -2.15
SIX6O95475 SRGNP1-201ENST00000603392 451 ntBASIC1.6□□□□□ -2.15
SIX6O95475 AL009028.1-201ENST00000604895 802 ntBASIC1.6□□□□□ -2.15
SIX6O95475 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.6□□□□□ -2.15
SIX6O95475 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.6□□□□□ -2.15
SIX6O95475 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
SIX6O95475 AC009487.4-201ENST00000624969 3585 ntBASIC1.6□□□□□ -2.15
SIX6O95475 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.59□□□□□ -2.15
SIX6O95475 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SIX6O95475 RNU6-1072P-201ENST00000384703 107 ntBASIC1.59□□□□□ -2.15
SIX6O95475 RNU6-443P-201ENST00000384780 107 ntBASIC1.59□□□□□ -2.15
SIX6O95475 NDUFB4P4-201ENST00000404822 243 ntBASIC1.59□□□□□ -2.15
SIX6O95475 NDUFA5P10-201ENST00000432147 357 ntBASIC1.59□□□□□ -2.15
SIX6O95475 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.59□□□□□ -2.15
SIX6O95475 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.59□□□□□ -2.15
SIX6O95475 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SIX6O95475 SETP11-201ENST00000473027 690 ntBASIC1.59□□□□□ -2.15
SIX6O95475 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.59□□□□□ -2.15
SIX6O95475 AC234778.2-201ENST00000566241 354 ntBASIC1.59□□□□□ -2.15
SIX6O95475 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.59□□□□□ -2.15
SIX6O95475 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.59□□□□□ -2.15
SIX6O95475 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.59□□□□□ -2.15
SIX6O95475 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.59□□□□□ -2.15
SIX6O95475 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
SIX6O95475 MTND4P31-201ENST00000425607 1343 ntBASIC1.59□□□□□ -2.16
SIX6O95475 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
SIX6O95475 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
SIX6O95475 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
SIX6O95475 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.59□□□□□ -2.16
SIX6O95475 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
SIX6O95475 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SIX6O95475 AL390862.1-201ENST00000635467 1469 ntBASIC1.58□□□□□ -2.16
SIX6O95475 AC022336.2-201ENST00000568966 2538 ntBASIC1.58□□□□□ -2.16
SIX6O95475 MTND5P6-201ENST00000422338 1798 ntBASIC1.58□□□□□ -2.16
SIX6O95475 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SIX6O95475 AC062016.1-201ENST00000355719 319 ntBASIC1.58□□□□□ -2.16
SIX6O95475 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SIX6O95475 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.58□□□□□ -2.16
SIX6O95475 SNORA1.3-201ENST00000384676 136 ntBASIC1.58□□□□□ -2.16
SIX6O95475 VN1R51P-201ENST00000411675 945 ntBASIC1.58□□□□□ -2.16
SIX6O95475 AL512504.1-201ENST00000415494 778 ntBASIC1.58□□□□□ -2.16
SIX6O95475 MTCYBP34-201ENST00000439552 670 ntBASIC1.58□□□□□ -2.16
SIX6O95475 AC107083.1-201ENST00000439643 279 ntBASIC1.58□□□□□ -2.16
SIX6O95475 HMGB1P48-201ENST00000446155 598 ntBASIC1.58□□□□□ -2.16
SIX6O95475 TPT1P14-201ENST00000448018 505 ntBASIC1.58□□□□□ -2.16
SIX6O95475 AC104978.1-201ENST00000449387 391 ntBASIC1.58□□□□□ -2.16
SIX6O95475 AC078857.1-201ENST00000469870 667 ntBASIC1.58□□□□□ -2.16
SIX6O95475 BZW1P2-201ENST00000473537 826 ntBASIC1.58□□□□□ -2.16
SIX6O95475 AC109329.2-201ENST00000519658 482 ntBASIC1.58□□□□□ -2.16
SIX6O95475 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.58□□□□□ -2.16
SIX6O95475 COX6CP5-201ENST00000527162 228 ntBASIC1.58□□□□□ -2.16
SIX6O95475 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.58□□□□□ -2.16
SIX6O95475 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.58□□□□□ -2.16
SIX6O95475 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.58□□□□□ -2.16
SIX6O95475 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.58□□□□□ -2.16
SIX6O95475 AL136363.1-201ENST00000605349 337 ntBASIC1.58□□□□□ -2.16
SIX6O95475 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.58□□□□□ -2.16
SIX6O95475 U6.48-201ENST00000618523 106 ntBASIC1.58□□□□□ -2.16
SIX6O95475 AL359893.1-201ENST00000447628 1580 ntBASIC1.58□□□□□ -2.16
SIX6O95475 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.57□□□□□ -2.16
SIX6O95475 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
SIX6O95475 RNU6-263P-201ENST00000363811 107 ntBASIC1.57□□□□□ -2.16
SIX6O95475 SNORA16.1-201ENST00000364597 132 ntBASIC1.57□□□□□ -2.16
SIX6O95475 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SIX6O95475 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
SIX6O95475 MIR17-201ENST00000385012 84 ntBASIC1.57□□□□□ -2.16
SIX6O95475 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
SIX6O95475 AC105402.1-201ENST00000413336 545 ntBASIC1.57□□□□□ -2.16
SIX6O95475 MTCO3P12-201ENST00000416718 547 ntBASIC1.57□□□□□ -2.16
SIX6O95475 BTF3P9-201ENST00000418784 283 ntBASIC1.57□□□□□ -2.16
SIX6O95475 RPL31P63-201ENST00000422565 375 ntBASIC1.57□□□□□ -2.16
SIX6O95475 IFNA20P-201ENST00000436840 528 ntBASIC1.57□□□□□ -2.16
SIX6O95475 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.57□□□□□ -2.16
SIX6O95475 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.57□□□□□ -2.16
SIX6O95475 PSPHP1-201ENST00000450062 261 ntBASIC1.57□□□□□ -2.16
SIX6O95475 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.57□□□□□ -2.16
SIX6O95475 RPL31P53-201ENST00000457065 348 ntBASIC1.57□□□□□ -2.16
SIX6O95475 RN7SL432P-201ENST00000484057 298 ntBASIC1.57□□□□□ -2.16
SIX6O95475 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.57□□□□□ -2.16
SIX6O95475 AC002456.2-201ENST00000509356 380 ntBASIC1.57□□□□□ -2.16
SIX6O95475 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.57□□□□□ -2.16
SIX6O95475 AP002812.4-201ENST00000532139 286 ntBASIC1.57□□□□□ -2.16
SIX6O95475 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms