Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.18□□□□□ -1.9
PCF11O94913 MIR6504-201ENST00000613520 61 ntBASIC3.18□□□□□ -1.9
PCF11O94913 XIST_intron.1-201ENST00000619444 68 ntBASIC3.18□□□□□ -1.9
PCF11O94913 AC244517.1-201ENST00000606030 2086 ntBASIC3.18□□□□□ -1.9
PCF11O94913 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.18□□□□□ -1.9
PCF11O94913 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCF11O94913 MIR9-3-201ENST00000385084 90 ntBASIC3.17□□□□□ -1.9
PCF11O94913 U3.37-201ENST00000408528 213 ntBASIC3.17□□□□□ -1.9
PCF11O94913 EI24P1-201ENST00000416584 867 ntBASIC3.17□□□□□ -1.9
PCF11O94913 ATP5F1P1-201ENST00000433775 569 ntBASIC3.17□□□□□ -1.9
PCF11O94913 AC129850.1-201ENST00000436203 508 ntBASIC3.17□□□□□ -1.9
PCF11O94913 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.17□□□□□ -1.9
PCF11O94913 RNU4-60P-201ENST00000517239 135 ntBASIC3.17□□□□□ -1.9
PCF11O94913 PTP4A1P6-201ENST00000531034 478 ntBASIC3.17□□□□□ -1.9
PCF11O94913 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.17□□□□□ -1.9
PCF11O94913 CENPUP2-201ENST00000555897 1186 ntBASIC3.17□□□□□ -1.9
PCF11O94913 AL360085.1-201ENST00000604713 532 ntBASIC3.17□□□□□ -1.9
PCF11O94913 AC090425.2-201ENST00000608818 501 ntBASIC3.17□□□□□ -1.9
PCF11O94913 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.17□□□□□ -1.9
PCF11O94913 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
PCF11O94913 AC010680.1-201ENST00000590024 3590 ntBASIC3.17□□□□□ -1.9
PCF11O94913 RNA5SP190-201ENST00000365222 118 ntBASIC3.17□□□□□ -1.9
PCF11O94913 RNU6-356P-201ENST00000384140 107 ntBASIC3.17□□□□□ -1.9
PCF11O94913 RPL34P26-201ENST00000445636 354 ntBASIC3.17□□□□□ -1.9
PCF11O94913 CBWD4P-201ENST00000445695 655 ntBASIC3.17□□□□□ -1.9
PCF11O94913 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.17□□□□□ -1.9
PCF11O94913 HMGN2P21-201ENST00000447764 270 ntBASIC3.17□□□□□ -1.9
PCF11O94913 BUD31P2-201ENST00000449374 300 ntBASIC3.17□□□□□ -1.9
PCF11O94913 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.17□□□□□ -1.9
PCF11O94913 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.17□□□□□ -1.9
PCF11O94913 DNAJC19P9-201ENST00000555084 351 ntBASIC3.17□□□□□ -1.9
PCF11O94913 AL354943.1-201ENST00000572103 781 ntBASIC3.17□□□□□ -1.9
PCF11O94913 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.17□□□□□ -1.9
PCF11O94913 AL356575.1-201ENST00000603008 283 ntBASIC3.17□□□□□ -1.9
PCF11O94913 AC022079.2-201ENST00000619739 566 ntBASIC3.17□□□□□ -1.9
PCF11O94913 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCF11O94913 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
PCF11O94913 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCF11O94913 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.16□□□□□ -1.9
PCF11O94913 AF274854.1-201ENST00000413236 615 ntBASIC3.16□□□□□ -1.9
PCF11O94913 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
PCF11O94913 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.16□□□□□ -1.9
PCF11O94913 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.16□□□□□ -1.9
PCF11O94913 RPS29P11-201ENST00000496507 171 ntBASIC3.16□□□□□ -1.9
PCF11O94913 RN7SKP40-201ENST00000517211 242 ntBASIC3.16□□□□□ -1.9
PCF11O94913 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.16□□□□□ -1.9
PCF11O94913 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.16□□□□□ -1.9
PCF11O94913 AL627309.6-201ENST00000606857 840 ntBASIC3.16□□□□□ -1.9
PCF11O94913 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.15□□□□□ -1.9
PCF11O94913 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.15□□□□□ -1.9
PCF11O94913 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PCF11O94913 RNU6-317P-201ENST00000384031 107 ntBASIC3.15□□□□□ -1.91
PCF11O94913 ELOCP11-201ENST00000436690 332 ntBASIC3.15□□□□□ -1.91
PCF11O94913 AL031663.1-201ENST00000437445 219 ntBASIC3.15□□□□□ -1.91
PCF11O94913 ELOCP16-201ENST00000444494 332 ntBASIC3.15□□□□□ -1.91
PCF11O94913 AL121594.1-201ENST00000475906 575 ntBASIC3.15□□□□□ -1.91
PCF11O94913 MLLT10P2-201ENST00000506434 249 ntBASIC3.15□□□□□ -1.91
PCF11O94913 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.15□□□□□ -1.91
PCF11O94913 RNA5SP402-201ENST00000517148 110 ntBASIC3.15□□□□□ -1.91
PCF11O94913 AC110588.1-201ENST00000559699 137 ntBASIC3.15□□□□□ -1.91
PCF11O94913 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.15□□□□□ -1.91
PCF11O94913 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.15□□□□□ -1.91
PCF11O94913 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
PCF11O94913 Y_RNA.783-201ENST00000613546 102 ntBASIC3.15□□□□□ -1.91
PCF11O94913 LINC00216-201ENST00000623548 1126 ntBASIC3.15□□□□□ -1.91
PCF11O94913 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCF11O94913 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCF11O94913 SNORA51.11-201ENST00000384442 131 ntBASIC3.14□□□□□ -1.91
PCF11O94913 RPL31P2-201ENST00000413849 377 ntBASIC3.14□□□□□ -1.91
PCF11O94913 MTND4P11-201ENST00000417020 1058 ntBASIC3.14□□□□□ -1.91
PCF11O94913 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.14□□□□□ -1.91
PCF11O94913 RPL30P11-201ENST00000495304 339 ntBASIC3.14□□□□□ -1.91
PCF11O94913 OR52A4P-203ENST00000498233 1014 ntBASIC3.14□□□□□ -1.91
PCF11O94913 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.14□□□□□ -1.91
PCF11O94913 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.14□□□□□ -1.91
PCF11O94913 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.14□□□□□ -1.91
PCF11O94913 SNRPGP19-201ENST00000603826 189 ntBASIC3.14□□□□□ -1.91
PCF11O94913 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.14□□□□□ -1.91
PCF11O94913 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCF11O94913 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PCF11O94913 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
PCF11O94913 RNU6-673P-201ENST00000365084 104 ntBASIC3.13□□□□□ -1.91
PCF11O94913 Y_RNA.374-201ENST00000365606 101 ntBASIC3.13□□□□□ -1.91
PCF11O94913 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.13□□□□□ -1.91
PCF11O94913 YWHAZP7-201ENST00000436906 631 ntBASIC3.13□□□□□ -1.91
PCF11O94913 MTCYBP12-201ENST00000440559 1134 ntBASIC3.13□□□□□ -1.91
PCF11O94913 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.13□□□□□ -1.91
PCF11O94913 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.13□□□□□ -1.91
PCF11O94913 AC017007.3-201ENST00000479865 435 ntBASIC3.13□□□□□ -1.91
PCF11O94913 GZMAP1-201ENST00000503054 631 ntBASIC3.13□□□□□ -1.91
PCF11O94913 HMGB3P15-201ENST00000507326 574 ntBASIC3.13□□□□□ -1.91
PCF11O94913 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.13□□□□□ -1.91
PCF11O94913 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.13□□□□□ -1.91
PCF11O94913 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.13□□□□□ -1.91
PCF11O94913 MIR3683-201ENST00000580847 82 ntBASIC3.13□□□□□ -1.91
PCF11O94913 RPAP2P1-201ENST00000603626 1168 ntBASIC3.13□□□□□ -1.91
PCF11O94913 BX248123.2-201ENST00000606318 124 ntBASIC3.13□□□□□ -1.91
PCF11O94913 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
PCF11O94913 AC007256.1-201ENST00000392253 2765 ntBASIC3.13□□□□□ -1.91
PCF11O94913 AL157700.1-201ENST00000561973 1432 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms