Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.54□□□□□ -1.68
CDKL5O76039 RNU6-875P-201ENST00000516488 106 ntBASIC4.54□□□□□ -1.68
CDKL5O76039 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
CDKL5O76039 AC109635.3-201ENST00000529536 185 ntBASIC4.54□□□□□ -1.68
CDKL5O76039 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.54□□□□□ -1.68
CDKL5O76039 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.54□□□□□ -1.68
CDKL5O76039 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.54□□□□□ -1.68
CDKL5O76039 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.54□□□□□ -1.68
CDKL5O76039 TPMTP1-201ENST00000592307 737 ntBASIC4.54□□□□□ -1.68
CDKL5O76039 AL117336.2-201ENST00000602435 335 ntBASIC4.54□□□□□ -1.68
CDKL5O76039 AC123786.2-201ENST00000603459 275 ntBASIC4.54□□□□□ -1.68
CDKL5O76039 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDKL5O76039 HSPE1P14-201ENST00000605812 302 ntBASIC4.54□□□□□ -1.68
CDKL5O76039 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.54□□□□□ -1.68
CDKL5O76039 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDKL5O76039 AL020991.1-201ENST00000612314 373 ntBASIC4.54□□□□□ -1.68
CDKL5O76039 AC116447.1-201ENST00000613153 453 ntBASIC4.54□□□□□ -1.68
CDKL5O76039 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.54□□□□□ -1.68
CDKL5O76039 AC009033.1-201ENST00000624279 431 ntBASIC4.54□□□□□ -1.68
CDKL5O76039 CR392039.4-201ENST00000624968 501 ntBASIC4.54□□□□□ -1.68
CDKL5O76039 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.54□□□□□ -1.68
CDKL5O76039 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CDKL5O76039 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.54□□□□□ -1.68
CDKL5O76039 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.54□□□□□ -1.68
CDKL5O76039 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDKL5O76039 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDKL5O76039 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDKL5O76039 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.53□□□□□ -1.68
CDKL5O76039 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDKL5O76039 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDKL5O76039 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDKL5O76039 CBX3P1-201ENST00000325243 554 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 Y_RNA.1-201ENST00000352915 104 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CDKL5O76039 SNORA70.2-201ENST00000364506 135 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CDKL5O76039 MIR199A2-201ENST00000385289 110 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 SNORD115.1-201ENST00000391109 76 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 RN7SKP177-201ENST00000410567 355 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 RPS3AP9-201ENST00000417027 792 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.53□□□□□ -1.68
CDKL5O76039 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.53□□□□□ -1.68
CDKL5O76039 AL589872.1-201ENST00000426602 288 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 ARPC3P1-201ENST00000437218 533 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.53□□□□□ -1.68
CDKL5O76039 AL354710.1-201ENST00000453641 246 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 HMGN3P1-201ENST00000453847 193 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.53□□□□□ -1.68
CDKL5O76039 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.53□□□□□ -1.68
CDKL5O76039 AP000852.1-201ENST00000472460 573 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 AC010301.1-201ENST00000473936 355 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 RBM43P1-201ENST00000476891 1081 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 PPIAP15-201ENST00000479662 484 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 MTCYBP18-201ENST00000501056 747 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 AC006390.1-201ENST00000508068 283 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.53□□□□□ -1.68
CDKL5O76039 FTH1P9-201ENST00000513251 355 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 AC034159.1-201ENST00000513885 583 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 AC104986.1-201ENST00000517978 436 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.53□□□□□ -1.68
CDKL5O76039 MTND1P35-201ENST00000526739 508 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDKL5O76039 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.53□□□□□ -1.68
CDKL5O76039 AL157687.1-201ENST00000554853 619 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 AC068714.1-201ENST00000559623 800 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 MIR3682-201ENST00000581338 84 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.53□□□□□ -1.68
CDKL5O76039 AC008752.3-201ENST00000588113 712 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 AC060780.3-201ENST00000589464 80 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.53□□□□□ -1.68
CDKL5O76039 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.53□□□□□ -1.68
CDKL5O76039 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDKL5O76039 AL592436.1-201ENST00000605135 558 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.53□□□□□ -1.68
CDKL5O76039 AC009268.2-201ENST00000621925 457 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 MIR6500-201ENST00000622700 86 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 AL732618.1-201ENST00000623251 301 ntBASIC4.53□□□□□ -1.68
CDKL5O76039 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.53□□□□□ -1.68
CDKL5O76039 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDKL5O76039 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CDKL5O76039 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDKL5O76039 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.53□□□□□ -1.68
CDKL5O76039 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDKL5O76039 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.53□□□□□ -1.68
CDKL5O76039 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
CDKL5O76039 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
CDKL5O76039 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.52□□□□□ -1.69
CDKL5O76039 AC009229.4-201ENST00000623854 1947 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.52□□□□□ -1.69
CDKL5O76039 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.52□□□□□ -1.69
CDKL5O76039 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDKL5O76039 GNG5P1-201ENST00000255500 204 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 RNU6-1103P-201ENST00000384150 107 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 RNU1-13P-201ENST00000384499 162 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.52□□□□□ -1.69
CDKL5O76039 HLFP1-201ENST00000402375 499 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 RPS20P2-201ENST00000402520 389 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 RN7SKP285-201ENST00000410137 318 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 MTCO1P17-201ENST00000411522 491 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms