Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.64□□□□□ -1.83
GPC4O75487 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
GPC4O75487 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GPC4O75487 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
GPC4O75487 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.63□□□□□ -1.83
GPC4O75487 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
GPC4O75487 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GPC4O75487 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
GPC4O75487 RNU5F-6P-201ENST00000362979 116 ntBASIC3.63□□□□□ -1.83
GPC4O75487 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
GPC4O75487 RNU6-114P-201ENST00000384704 105 ntBASIC3.63□□□□□ -1.83
GPC4O75487 SNORA26.8-201ENST00000391306 124 ntBASIC3.63□□□□□ -1.83
GPC4O75487 RPL7P60-201ENST00000397636 735 ntBASIC3.63□□□□□ -1.83
GPC4O75487 AL590704.1-201ENST00000402856 794 ntBASIC3.63□□□□□ -1.83
GPC4O75487 MIR1302-8-201ENST00000408342 128 ntBASIC3.63□□□□□ -1.83
GPC4O75487 RN7SKP159-201ENST00000410657 292 ntBASIC3.63□□□□□ -1.83
GPC4O75487 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.63□□□□□ -1.83
GPC4O75487 BEND7P1-201ENST00000422058 457 ntBASIC3.63□□□□□ -1.83
GPC4O75487 RPS27AP14-201ENST00000422868 454 ntBASIC3.63□□□□□ -1.83
GPC4O75487 AC002075.2-201ENST00000425207 252 ntBASIC3.63□□□□□ -1.83
GPC4O75487 AC006989.1-201ENST00000427212 131 ntBASIC3.63□□□□□ -1.83
GPC4O75487 OR4K11P-201ENST00000431829 904 ntBASIC3.63□□□□□ -1.83
GPC4O75487 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.63□□□□□ -1.83
GPC4O75487 MTND1P30-201ENST00000441241 901 ntBASIC3.63□□□□□ -1.83
GPC4O75487 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.63□□□□□ -1.83
GPC4O75487 TXNP1-201ENST00000441872 371 ntBASIC3.63□□□□□ -1.83
GPC4O75487 MTND2P4-201ENST00000445034 1004 ntBASIC3.63□□□□□ -1.83
GPC4O75487 AC010655.1-201ENST00000449336 292 ntBASIC3.63□□□□□ -1.83
GPC4O75487 AC007967.1-201ENST00000455422 1159 ntBASIC3.63□□□□□ -1.83
GPC4O75487 MTCO1P42-201ENST00000457379 726 ntBASIC3.63□□□□□ -1.83
GPC4O75487 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.63□□□□□ -1.83
GPC4O75487 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.63□□□□□ -1.83
GPC4O75487 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.63□□□□□ -1.83
GPC4O75487 AC006499.5-201ENST00000505037 514 ntBASIC3.63□□□□□ -1.83
GPC4O75487 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
GPC4O75487 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
GPC4O75487 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.63□□□□□ -1.83
GPC4O75487 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.63□□□□□ -1.83
GPC4O75487 AC060788.1-201ENST00000521318 469 ntBASIC3.63□□□□□ -1.83
GPC4O75487 AC093331.1-201ENST00000521474 169 ntBASIC3.63□□□□□ -1.83
GPC4O75487 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.63□□□□□ -1.83
GPC4O75487 AC008489.1-201ENST00000524271 483 ntBASIC3.63□□□□□ -1.83
GPC4O75487 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.63□□□□□ -1.83
GPC4O75487 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.63□□□□□ -1.83
GPC4O75487 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.63□□□□□ -1.83
GPC4O75487 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.63□□□□□ -1.83
GPC4O75487 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.63□□□□□ -1.83
GPC4O75487 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.63□□□□□ -1.83
GPC4O75487 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.63□□□□□ -1.83
GPC4O75487 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.63□□□□□ -1.83
GPC4O75487 MIR3690-201ENST00000580266 75 ntBASIC3.63□□□□□ -1.83
GPC4O75487 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.63□□□□□ -1.83
GPC4O75487 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.63□□□□□ -1.83
GPC4O75487 AF131215.7-201ENST00000602443 707 ntBASIC3.63□□□□□ -1.83
GPC4O75487 AL391497.1-201ENST00000608671 547 ntBASIC3.63□□□□□ -1.83
GPC4O75487 AC004908.3-201ENST00000610248 625 ntBASIC3.63□□□□□ -1.83
GPC4O75487 RNVU1-4-201ENST00000612985 164 ntBASIC3.63□□□□□ -1.83
GPC4O75487 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.63□□□□□ -1.83
GPC4O75487 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
GPC4O75487 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.63□□□□□ -1.83
GPC4O75487 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
GPC4O75487 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
GPC4O75487 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
GPC4O75487 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
GPC4O75487 MTND5P33-201ENST00000571250 1450 ntBASIC3.62□□□□□ -1.83
GPC4O75487 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
GPC4O75487 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
GPC4O75487 RNU4-21P-201ENST00000362802 126 ntBASIC3.62□□□□□ -1.83
GPC4O75487 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.62□□□□□ -1.83
GPC4O75487 RNU6-1181P-201ENST00000384191 106 ntBASIC3.62□□□□□ -1.83
GPC4O75487 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
GPC4O75487 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.62□□□□□ -1.83
GPC4O75487 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.62□□□□□ -1.83
GPC4O75487 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.62□□□□□ -1.83
GPC4O75487 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.62□□□□□ -1.83
GPC4O75487 AC007390.1-201ENST00000415722 356 ntBASIC3.62□□□□□ -1.83
GPC4O75487 HMGB3P20-201ENST00000417997 600 ntBASIC3.62□□□□□ -1.83
GPC4O75487 AL137014.1-201ENST00000420490 1226 ntBASIC3.62□□□□□ -1.83
GPC4O75487 MTCO1P39-201ENST00000426148 480 ntBASIC3.62□□□□□ -1.83
GPC4O75487 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.62□□□□□ -1.83
GPC4O75487 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.62□□□□□ -1.83
GPC4O75487 VDAC1P3-201ENST00000434069 851 ntBASIC3.62□□□□□ -1.83
GPC4O75487 NDUFB1P1-201ENST00000435191 180 ntBASIC3.62□□□□□ -1.83
GPC4O75487 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.62□□□□□ -1.83
GPC4O75487 RPL37P21-201ENST00000435890 276 ntBASIC3.62□□□□□ -1.83
GPC4O75487 NOTCH2P1-201ENST00000443481 624 ntBASIC3.62□□□□□ -1.83
GPC4O75487 AC112653.1-201ENST00000443851 386 ntBASIC3.62□□□□□ -1.83
GPC4O75487 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
GPC4O75487 RPS29P31-201ENST00000446147 164 ntBASIC3.62□□□□□ -1.83
GPC4O75487 Z83846.1-201ENST00000446798 265 ntBASIC3.62□□□□□ -1.83
GPC4O75487 AC099563.1-201ENST00000456086 418 ntBASIC3.62□□□□□ -1.83
GPC4O75487 RPS3AP50-201ENST00000487064 803 ntBASIC3.62□□□□□ -1.83
GPC4O75487 AC034222.1-201ENST00000494052 532 ntBASIC3.62□□□□□ -1.83
GPC4O75487 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.62□□□□□ -1.83
GPC4O75487 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.62□□□□□ -1.83
GPC4O75487 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.62□□□□□ -1.83
GPC4O75487 AC023141.12-201ENST00000512399 199 ntBASIC3.62□□□□□ -1.83
GPC4O75487 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.62□□□□□ -1.83
GPC4O75487 AC116347.2-201ENST00000514912 523 ntBASIC3.62□□□□□ -1.83
GPC4O75487 RNU2-58P-201ENST00000516403 183 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms