Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 DEFB109D-201ENST00000529497 240 ntBASIC4.26□□□□□ -1.73
VPS4BO75351 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS4BO75351 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.26□□□□□ -1.73
VPS4BO75351 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS4BO75351 AP003117.2-201ENST00000606010 545 ntBASIC4.26□□□□□ -1.73
VPS4BO75351 AC008536.2-201ENST00000607284 349 ntBASIC4.26□□□□□ -1.73
VPS4BO75351 AC105429.2-201ENST00000610567 517 ntBASIC4.26□□□□□ -1.73
VPS4BO75351 uc_338.12-201ENST00000616344 181 ntBASIC4.26□□□□□ -1.73
VPS4BO75351 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS4BO75351 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS4BO75351 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS4BO75351 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS4BO75351 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS4BO75351 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
VPS4BO75351 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS4BO75351 RNU6-989P-201ENST00000362756 107 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 SNORA62.3-201ENST00000365110 153 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 RNU6-108P-201ENST00000365558 107 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS4BO75351 SNORA20.2-201ENST00000383922 131 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 Y_RNA.409-201ENST00000383990 98 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 Y_RNA.481-201ENST00000384373 102 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 Y_RNA.573-201ENST00000384763 105 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 MIR19A-201ENST00000384878 82 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 AL603766.1-201ENST00000407763 664 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 RN7SKP285-201ENST00000410137 318 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 RPS20P14-201ENST00000412545 360 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS4BO75351 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS4BO75351 MTCO1P20-201ENST00000425366 358 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 PSMA2P3-201ENST00000429685 675 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS4BO75351 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS4BO75351 RPL7P19-201ENST00000469948 618 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 AP002812.1-201ENST00000495378 474 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 AC017037.1-201ENST00000508460 471 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 MTCO1P24-201ENST00000515438 1558 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 AC090572.1-201ENST00000519251 160 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 AC104383.1-201ENST00000530297 370 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS4BO75351 AL352979.3-201ENST00000553515 247 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 AL512360.1-201ENST00000555346 234 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 AC068831.4-201ENST00000556118 109 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS4BO75351 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS4BO75351 BNIP3P30-201ENST00000601184 574 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 KC877982.1-201ENST00000602313 470 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 AC012507.3-201ENST00000603556 477 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 AL357078.3-201ENST00000607528 618 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 AC006329.2-201ENST00000611491 394 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 AL590099.1-201ENST00000615276 138 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 AC092794.2-201ENST00000620933 563 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 AC139792.3-201ENST00000623525 224 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 AC040168.1-201ENST00000623594 991 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 AC005609.4-201ENST00000625071 447 ntBASIC4.25□□□□□ -1.73
VPS4BO75351 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS4BO75351 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS4BO75351 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS4BO75351 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
VPS4BO75351 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS4BO75351 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS4BO75351 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS4BO75351 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS4BO75351 AL133412.1-201ENST00000380194 2992 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS4BO75351 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
VPS4BO75351 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
VPS4BO75351 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS4BO75351 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS4BO75351 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
VPS4BO75351 Y_RNA.89-201ENST00000363031 102 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 SNORD74.4-201ENST00000364129 80 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 RNY4P16-201ENST00000364768 94 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 RNU6-114P-201ENST00000384704 105 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 MT-TC-201ENST00000387405 66 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 RPS4XP8-201ENST00000402039 771 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS4BO75351 AL109913.1-201ENST00000421173 514 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 RPL7AP25-201ENST00000423357 805 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS4BO75351 ELOCP14-201ENST00000428070 331 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS4BO75351 TIMM9P1-201ENST00000436122 256 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 FTH1P1-201ENST00000437933 532 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 ELOCP7-201ENST00000439968 331 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 AL353748.1-201ENST00000440753 474 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 RPL21P89-201ENST00000444021 467 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS4BO75351 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS4BO75351 RPL21P126-201ENST00000470049 478 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 RN7SL810P-201ENST00000493031 276 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 VWA8P1-201ENST00000510889 176 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 AC017037.2-201ENST00000513850 890 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS4BO75351 RNA5SP337-201ENST00000517007 109 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 AP000827.1-201ENST00000527814 258 ntBASIC4.24□□□□□ -1.73
VPS4BO75351 OR4P1P-201ENST00000530808 1136 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms