Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 Y_RNA.44-201ENST00000362676 108 ntBASIC6.34□□□□□ -1.39
RNF40O75150 Y_RNA.292-201ENST00000364904 97 ntBASIC6.34□□□□□ -1.39
RNF40O75150 RN7SKP292-201ENST00000365522 317 ntBASIC6.34□□□□□ -1.39
RNF40O75150 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RNF40O75150 SNORA5.1-201ENST00000384275 131 ntBASIC6.34□□□□□ -1.39
RNF40O75150 RNU4-65P-201ENST00000410473 140 ntBASIC6.34□□□□□ -1.39
RNF40O75150 AC093655.2-201ENST00000425735 631 ntBASIC6.34□□□□□ -1.39
RNF40O75150 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.34□□□□□ -1.39
RNF40O75150 RPL23AP81-201ENST00000455252 467 ntBASIC6.34□□□□□ -1.39
RNF40O75150 HSPE1P25-201ENST00000455484 251 ntBASIC6.34□□□□□ -1.39
RNF40O75150 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF40O75150 RNU6-27P-201ENST00000516146 107 ntBASIC6.34□□□□□ -1.39
RNF40O75150 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC6.34□□□□□ -1.39
RNF40O75150 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.34□□□□□ -1.39
RNF40O75150 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF40O75150 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC6.34□□□□□ -1.39
RNF40O75150 HMGN2P47-201ENST00000559378 272 ntBASIC6.34□□□□□ -1.39
RNF40O75150 AC020916.2-201ENST00000591242 360 ntBASIC6.34□□□□□ -1.39
RNF40O75150 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.34□□□□□ -1.39
RNF40O75150 AC123768.4-201ENST00000616244 701 ntBASIC6.34□□□□□ -1.39
RNF40O75150 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.34□□□□□ -1.39
RNF40O75150 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
RNF40O75150 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RNF40O75150 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF40O75150 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
RNF40O75150 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RNF40O75150 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.34□□□□□ -1.39
RNF40O75150 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RNF40O75150 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RNF40O75150 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.34□□□□□ -1.4
RNF40O75150 AC005224.3-201ENST00000584683 2140 ntBASIC6.34□□□□□ -1.4
RNF40O75150 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
RNF40O75150 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
RNF40O75150 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.34□□□□□ -1.4
RNF40O75150 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF40O75150 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
RNF40O75150 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF40O75150 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
RNF40O75150 AC020656.2-201ENST00000613291 5309 ntBASIC6.33□□□□□ -1.4
RNF40O75150 RNU1-49P-201ENST00000363468 159 ntBASIC6.33□□□□□ -1.4
RNF40O75150 SNORD113-8-201ENST00000363497 74 ntBASIC6.33□□□□□ -1.4
RNF40O75150 CRP-202ENST00000368110 667 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF40O75150 Y_RNA.418-201ENST00000384029 102 ntBASIC6.33□□□□□ -1.4
RNF40O75150 MTCYBP2-201ENST00000407745 171 ntBASIC6.33□□□□□ -1.4
RNF40O75150 RNA5SP156-201ENST00000410250 110 ntBASIC6.33□□□□□ -1.4
RNF40O75150 TMEM167AP1-201ENST00000423409 219 ntBASIC6.33□□□□□ -1.4
RNF40O75150 AL360271.2-201ENST00000447710 161 ntBASIC6.33□□□□□ -1.4
RNF40O75150 RNU6-1218P-201ENST00000458990 108 ntBASIC6.33□□□□□ -1.4
RNF40O75150 snoU13.7-201ENST00000459220 104 ntBASIC6.33□□□□□ -1.4
RNF40O75150 RPL37P6-201ENST00000460682 294 ntBASIC6.33□□□□□ -1.4
RNF40O75150 AC053481.1-201ENST00000467217 306 ntBASIC6.33□□□□□ -1.4
RNF40O75150 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF40O75150 AC010343.2-201ENST00000510162 224 ntBASIC6.33□□□□□ -1.4
RNF40O75150 RNU6-677P-201ENST00000516914 101 ntBASIC6.33□□□□□ -1.4
RNF40O75150 Y_RNA.710-201ENST00000516975 110 ntBASIC6.33□□□□□ -1.4
RNF40O75150 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF40O75150 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF40O75150 AL031601.2-202ENST00000622650 282 ntBASIC6.33□□□□□ -1.4
RNF40O75150 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF40O75150 AP000550.3-201ENST00000637734 379 ntBASIC6.33□□□□□ -1.4
RNF40O75150 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.33□□□□□ -1.4
RNF40O75150 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF40O75150 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.33□□□□□ -1.4
RNF40O75150 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF40O75150 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.33□□□□□ -1.4
RNF40O75150 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
RNF40O75150 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF40O75150 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RNF40O75150 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
RNF40O75150 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF40O75150 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF40O75150 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF40O75150 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF40O75150 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
RNF40O75150 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RNF40O75150 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
RNF40O75150 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF40O75150 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RNF40O75150 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF40O75150 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF40O75150 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF40O75150 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF40O75150 BCORP1-203ENST00000513194 5093 ntBASIC6.32□□□□□ -1.4
RNF40O75150 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF40O75150 RNA5SP391-201ENST00000363456 119 ntBASIC6.32□□□□□ -1.4
RNF40O75150 RNY3P4-201ENST00000384428 101 ntBASIC6.32□□□□□ -1.4
RNF40O75150 Y_RNA.602-201ENST00000410535 92 ntBASIC6.32□□□□□ -1.4
RNF40O75150 RNA5SP494-201ENST00000410653 129 ntBASIC6.32□□□□□ -1.4
RNF40O75150 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF40O75150 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF40O75150 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF40O75150 CEACAMP1-201ENST00000434624 1035 ntBASIC6.32□□□□□ -1.4
RNF40O75150 CEACAMP7-201ENST00000444105 496 ntBASIC6.32□□□□□ -1.4
RNF40O75150 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF40O75150 AC005077.1-201ENST00000449226 375 ntBASIC6.32□□□□□ -1.4
RNF40O75150 AL162739.1-201ENST00000450606 307 ntBASIC6.32□□□□□ -1.4
RNF40O75150 RN7SL273P-201ENST00000481561 299 ntBASIC6.32□□□□□ -1.4
RNF40O75150 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF40O75150 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF40O75150 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms