Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 RNU1-91P-201ENST00000364746 163 ntBASIC3.15□□□□□ -1.9
BRD4O60885 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.15□□□□□ -1.9
BRD4O60885 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
BRD4O60885 U3.37-201ENST00000408528 213 ntBASIC3.15□□□□□ -1.9
BRD4O60885 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
BRD4O60885 CR769767.1-201ENST00000436337 346 ntBASIC3.15□□□□□ -1.9
BRD4O60885 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.15□□□□□ -1.9
BRD4O60885 RPS29P12-201ENST00000460178 152 ntBASIC3.15□□□□□ -1.9
BRD4O60885 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.15□□□□□ -1.9
BRD4O60885 AC111193.1-201ENST00000504097 155 ntBASIC3.15□□□□□ -1.9
BRD4O60885 ERHP1-201ENST00000523006 310 ntBASIC3.15□□□□□ -1.9
BRD4O60885 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.15□□□□□ -1.9
BRD4O60885 OR4R2P-201ENST00000530815 597 ntBASIC3.15□□□□□ -1.9
BRD4O60885 OSBPL9P3-201ENST00000534523 595 ntBASIC3.15□□□□□ -1.9
BRD4O60885 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.15□□□□□ -1.9
BRD4O60885 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.15□□□□□ -1.9
BRD4O60885 RNA5SP139-201ENST00000364340 117 ntBASIC3.14□□□□□ -1.91
BRD4O60885 RNU1-109P-201ENST00000383960 147 ntBASIC3.14□□□□□ -1.91
BRD4O60885 RNU6-629P-201ENST00000384061 103 ntBASIC3.14□□□□□ -1.91
BRD4O60885 AL096701.2-201ENST00000416920 238 ntBASIC3.14□□□□□ -1.91
BRD4O60885 RPL21P32-201ENST00000419877 477 ntBASIC3.14□□□□□ -1.91
BRD4O60885 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.14□□□□□ -1.91
BRD4O60885 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.14□□□□□ -1.91
BRD4O60885 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC3.14□□□□□ -1.91
BRD4O60885 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.14□□□□□ -1.91
BRD4O60885 TPTE2P6-202ENST00000445572 1007 ntBASIC3.14□□□□□ -1.91
BRD4O60885 HMGB1P48-201ENST00000446155 598 ntBASIC3.14□□□□□ -1.91
BRD4O60885 AC021087.2-201ENST00000504656 1203 ntBASIC3.14□□□□□ -1.91
BRD4O60885 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
BRD4O60885 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
BRD4O60885 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.14□□□□□ -1.91
BRD4O60885 POLR2KP1-201ENST00000553226 168 ntBASIC3.14□□□□□ -1.91
BRD4O60885 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.14□□□□□ -1.91
BRD4O60885 AC105137.2-201ENST00000569073 466 ntBASIC3.14□□□□□ -1.91
BRD4O60885 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
BRD4O60885 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.14□□□□□ -1.91
BRD4O60885 RNU1-51P-201ENST00000365345 176 ntBASIC3.13□□□□□ -1.91
BRD4O60885 RNU6-452P-201ENST00000384406 107 ntBASIC3.13□□□□□ -1.91
BRD4O60885 MTCO3P4-201ENST00000419236 787 ntBASIC3.13□□□□□ -1.91
BRD4O60885 RPS6P14-201ENST00000425165 719 ntBASIC3.13□□□□□ -1.91
BRD4O60885 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.13□□□□□ -1.91
BRD4O60885 AL627224.1-201ENST00000448334 444 ntBASIC3.13□□□□□ -1.91
BRD4O60885 AC010285.1-201ENST00000470580 392 ntBASIC3.13□□□□□ -1.91
BRD4O60885 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
BRD4O60885 RN7SKP219-201ENST00000516825 296 ntBASIC3.13□□□□□ -1.91
BRD4O60885 AC087241.2-201ENST00000535801 324 ntBASIC3.13□□□□□ -1.91
BRD4O60885 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
BRD4O60885 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.13□□□□□ -1.91
BRD4O60885 AC135803.1-201ENST00000608748 565 ntBASIC3.13□□□□□ -1.91
BRD4O60885 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
BRD4O60885 MIR6766-201ENST00000622641 72 ntBASIC3.13□□□□□ -1.91
BRD4O60885 MIR6873-201ENST00000622788 63 ntBASIC3.13□□□□□ -1.91
BRD4O60885 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.13□□□□□ -1.91
BRD4O60885 AC002064.3-201ENST00000623448 346 ntBASIC3.13□□□□□ -1.91
BRD4O60885 AL160394.1-201ENST00000624765 724 ntBASIC3.13□□□□□ -1.91
BRD4O60885 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.13□□□□□ -1.91
BRD4O60885 AC099654.7-201ENST00000635788 2127 ntBASIC3.13□□□□□ -1.91
BRD4O60885 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
BRD4O60885 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.13□□□□□ -1.91
BRD4O60885 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
BRD4O60885 AL161781.1-201ENST00000354277 403 ntBASIC3.12□□□□□ -1.91
BRD4O60885 RNU6-386P-201ENST00000362650 107 ntBASIC3.12□□□□□ -1.91
BRD4O60885 RNU1-138P-201ENST00000384093 164 ntBASIC3.12□□□□□ -1.91
BRD4O60885 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
BRD4O60885 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
BRD4O60885 SFR1P1-201ENST00000403720 688 ntBASIC3.12□□□□□ -1.91
BRD4O60885 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.12□□□□□ -1.91
BRD4O60885 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.12□□□□□ -1.91
BRD4O60885 snoU13.4-201ENST00000458916 104 ntBASIC3.12□□□□□ -1.91
BRD4O60885 RPL23AP42-201ENST00000471152 471 ntBASIC3.12□□□□□ -1.91
BRD4O60885 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.12□□□□□ -1.91
BRD4O60885 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.12□□□□□ -1.91
BRD4O60885 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.12□□□□□ -1.91
BRD4O60885 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.12□□□□□ -1.91
BRD4O60885 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.12□□□□□ -1.91
BRD4O60885 AC104237.2-201ENST00000612456 443 ntBASIC3.12□□□□□ -1.91
BRD4O60885 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
BRD4O60885 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
BRD4O60885 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.12□□□□□ -1.91
BRD4O60885 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
BRD4O60885 FO393413.1-201ENST00000402892 195 ntBASIC3.12□□□□□ -1.91
BRD4O60885 DHFRP5-201ENST00000406944 564 ntBASIC3.12□□□□□ -1.91
BRD4O60885 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.12□□□□□ -1.91
BRD4O60885 LSM1P1-201ENST00000438629 273 ntBASIC3.12□□□□□ -1.91
BRD4O60885 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.12□□□□□ -1.91
BRD4O60885 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.12□□□□□ -1.91
BRD4O60885 TRBV1-201ENST00000476502 284 ntBASIC3.12□□□□□ -1.91
BRD4O60885 AC025181.1-201ENST00000477507 416 ntBASIC3.12□□□□□ -1.91
BRD4O60885 AC068587.2-201ENST00000478386 781 ntBASIC3.12□□□□□ -1.91
BRD4O60885 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.12□□□□□ -1.91
BRD4O60885 XKRY-201ENST00000510392 1100 ntBASIC3.12□□□□□ -1.91
BRD4O60885 MTND5P4-201ENST00000514978 288 ntBASIC3.12□□□□□ -1.91
BRD4O60885 AC018630.1-201ENST00000541376 925 ntBASIC3.12□□□□□ -1.91
BRD4O60885 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.12□□□□□ -1.91
BRD4O60885 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.12□□□□□ -1.91
BRD4O60885 AC107954.1-201ENST00000565906 727 ntBASIC3.12□□□□□ -1.91
BRD4O60885 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.12□□□□□ -1.91
BRD4O60885 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.11□□□□□ -1.91
BRD4O60885 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.11□□□□□ -1.91
BRD4O60885 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms