Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
ZIC3O60481 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZIC3O60481 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.54□□□□□ -1.84
ZIC3O60481 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZIC3O60481 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.54□□□□□ -1.84
ZIC3O60481 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.54□□□□□ -1.84
ZIC3O60481 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.54□□□□□ -1.84
ZIC3O60481 AC012020.1-201ENST00000624541 1728 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
ZIC3O60481 RPL32P23-201ENST00000397237 405 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 RNA5SP239-201ENST00000410218 129 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 RNU6-712P-201ENST00000410558 100 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.54□□□□□ -1.84
ZIC3O60481 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.54□□□□□ -1.84
ZIC3O60481 BX295541.1-201ENST00000417774 250 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 AC004552.1-201ENST00000419089 348 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 USP9YP36-201ENST00000424581 829 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 ISCA1P6-201ENST00000427740 390 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 RPS6P12-201ENST00000432491 726 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ZIC3O60481 FTH1P1-201ENST00000437933 532 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 RPS29P7-201ENST00000439662 171 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 RANP8-201ENST00000444720 713 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 MTND1P1-201ENST00000445453 368 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.54□□□□□ -1.84
ZIC3O60481 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 AC093899.1-201ENST00000457984 376 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.54□□□□□ -1.84
ZIC3O60481 RPL21P11-201ENST00000461458 483 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 RPS26P3-201ENST00000470205 348 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.54□□□□□ -1.84
ZIC3O60481 AC090543.2-201ENST00000483963 348 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 AC004057.1-201ENST00000485827 348 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.54□□□□□ -1.84
ZIC3O60481 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 KCTD9P5-201ENST00000504141 1170 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.54□□□□□ -1.84
ZIC3O60481 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.54□□□□□ -1.84
ZIC3O60481 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.54□□□□□ -1.84
ZIC3O60481 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.54□□□□□ -1.84
ZIC3O60481 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.54□□□□□ -1.84
ZIC3O60481 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.54□□□□□ -1.84
ZIC3O60481 GNRHR2P1-201ENST00000555315 631 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.54□□□□□ -1.84
ZIC3O60481 NRBF2P1-201ENST00000587407 859 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.54□□□□□ -1.84
ZIC3O60481 AL139395.1-201ENST00000603662 160 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 AC121334.2-201ENST00000605387 271 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.54□□□□□ -1.84
ZIC3O60481 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ZIC3O60481 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ZIC3O60481 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.54□□□□□ -1.84
ZIC3O60481 OR5AK4P-201ENST00000635912 903 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 AC068137.3-201ENST00000639191 341 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 AC073869.6-201ENST00000640656 341 ntBASIC3.54□□□□□ -1.84
ZIC3O60481 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZIC3O60481 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ZIC3O60481 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.54□□□□□ -1.84
ZIC3O60481 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
ZIC3O60481 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ZIC3O60481 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.54□□□□□ -1.84
ZIC3O60481 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ZIC3O60481 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZIC3O60481 AL138713.1-201ENST00000624026 2130 ntBASIC3.53□□□□□ -1.84
ZIC3O60481 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZIC3O60481 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZIC3O60481 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.53□□□□□ -1.84
ZIC3O60481 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZIC3O60481 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZIC3O60481 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZIC3O60481 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZIC3O60481 SNORD74.4-201ENST00000364129 80 ntBASIC3.53□□□□□ -1.84
ZIC3O60481 RNU1-64P-201ENST00000365443 163 ntBASIC3.53□□□□□ -1.84
ZIC3O60481 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
ZIC3O60481 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
ZIC3O60481 MIR19A-201ENST00000384878 82 ntBASIC3.53□□□□□ -1.84
ZIC3O60481 RPL23AP32-201ENST00000395315 459 ntBASIC3.53□□□□□ -1.84
ZIC3O60481 SNORA3.3-201ENST00000408712 125 ntBASIC3.53□□□□□ -1.84
ZIC3O60481 OR1AA1P-201ENST00000419597 916 ntBASIC3.53□□□□□ -1.84
ZIC3O60481 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.53□□□□□ -1.84
ZIC3O60481 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.53□□□□□ -1.84
ZIC3O60481 AC233728.2-201ENST00000425348 757 ntBASIC3.53□□□□□ -1.84
ZIC3O60481 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZIC3O60481 RPL7P2-201ENST00000427639 268 ntBASIC3.53□□□□□ -1.84
ZIC3O60481 OR2B8P-201ENST00000432841 938 ntBASIC3.53□□□□□ -1.84
ZIC3O60481 KCTD9P3-201ENST00000434597 1169 ntBASIC3.53□□□□□ -1.84
ZIC3O60481 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ZIC3O60481 RAC1P7-201ENST00000445367 377 ntBASIC3.53□□□□□ -1.84
ZIC3O60481 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.53□□□□□ -1.84
ZIC3O60481 RPS17P13-201ENST00000448974 407 ntBASIC3.53□□□□□ -1.84
ZIC3O60481 AC093392.2-201ENST00000450682 337 ntBASIC3.53□□□□□ -1.84
ZIC3O60481 RPL9P6-201ENST00000492764 598 ntBASIC3.53□□□□□ -1.84
ZIC3O60481 AC020893.1-201ENST00000502452 580 ntBASIC3.53□□□□□ -1.84
ZIC3O60481 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.53□□□□□ -1.84
ZIC3O60481 AL117351.2-201ENST00000513571 157 ntBASIC3.53□□□□□ -1.84
ZIC3O60481 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.53□□□□□ -1.84
ZIC3O60481 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.53□□□□□ -1.84
ZIC3O60481 HSPE1P5-201ENST00000561489 272 ntBASIC3.53□□□□□ -1.84
ZIC3O60481 MIR3146-201ENST00000580367 79 ntBASIC3.53□□□□□ -1.84
ZIC3O60481 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms