Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.9□□□□□ -1.95
CHMP2AO43633 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.9□□□□□ -1.95
CHMP2AO43633 CKS1BP7-201ENST00000522230 235 ntBASIC2.9□□□□□ -1.95
CHMP2AO43633 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.9□□□□□ -1.95
CHMP2AO43633 OR10V3P-201ENST00000525712 725 ntBASIC2.9□□□□□ -1.95
CHMP2AO43633 AC018630.1-201ENST00000541376 925 ntBASIC2.9□□□□□ -1.95
CHMP2AO43633 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.9□□□□□ -1.95
CHMP2AO43633 NIFKP8-201ENST00000560500 874 ntBASIC2.9□□□□□ -1.95
CHMP2AO43633 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.9□□□□□ -1.95
CHMP2AO43633 AC104229.1-201ENST00000561364 255 ntBASIC2.9□□□□□ -1.95
CHMP2AO43633 AC106734.1-201ENST00000568646 663 ntBASIC2.9□□□□□ -1.95
CHMP2AO43633 BPTFP1-201ENST00000579209 492 ntBASIC2.9□□□□□ -1.95
CHMP2AO43633 GLUD1P4-201ENST00000590914 418 ntBASIC2.9□□□□□ -1.95
CHMP2AO43633 AC078899.3-201ENST00000599065 212 ntBASIC2.9□□□□□ -1.95
CHMP2AO43633 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CHMP2AO43633 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.9□□□□□ -1.95
CHMP2AO43633 AC006213.5-201ENST00000619673 288 ntBASIC2.9□□□□□ -1.95
CHMP2AO43633 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.9□□□□□ -1.95
CHMP2AO43633 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CHMP2AO43633 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CHMP2AO43633 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHMP2AO43633 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.89□□□□□ -1.95
CHMP2AO43633 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.89□□□□□ -1.95
CHMP2AO43633 MIR449A-201ENST00000362113 91 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 SNORD56.4-201ENST00000363883 71 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 RNA5SP68-201ENST00000363885 119 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHMP2AO43633 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.89□□□□□ -1.95
CHMP2AO43633 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CHMP2AO43633 CYCSP45-201ENST00000402289 315 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 RPS15AP38-201ENST00000413110 372 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 RPL31P54-201ENST00000429803 370 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 MTND4LP10-201ENST00000435146 291 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.89□□□□□ -1.95
CHMP2AO43633 UBBP3-201ENST00000445497 241 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 TRBV26-201ENST00000456572 344 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 NAP1L1P3-201ENST00000462291 880 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 AC093767.1-201ENST00000504523 156 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 AC098799.2-201ENST00000509466 868 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 RAC1P5-201ENST00000512182 576 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 AC114781.4-201ENST00000513707 639 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 RNA5SP282-201ENST00000516355 108 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 AC104986.1-201ENST00000517978 436 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 AP000916.1-201ENST00000533869 835 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 AC243972.3-201ENST00000539655 198 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 AL355836.1-201ENST00000555951 870 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 LINC00557-201ENST00000563184 1279 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 AP005205.1-201ENST00000563503 508 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 AC006116.7-201ENST00000590141 756 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 GAS5-AS1-201ENST00000602767 694 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 DUXAP4-201ENST00000603046 613 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 AC005776.1-201ENST00000603164 290 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 HSPE1P7-201ENST00000604681 321 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 AC055876.5-201ENST00000605667 259 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHMP2AO43633 AC131902.3-201ENST00000611767 581 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 AL359198.2-201ENST00000611836 194 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 AL445493.3-201ENST00000619568 477 ntBASIC2.89□□□□□ -1.95
CHMP2AO43633 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CHMP2AO43633 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHMP2AO43633 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
CHMP2AO43633 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CHMP2AO43633 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.88□□□□□ -1.95
CHMP2AO43633 U3.12-201ENST00000364498 214 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 RPL21P75-201ENST00000396599 483 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 RPL21P28-201ENST00000401418 483 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 AL592114.1-201ENST00000403842 483 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 PTGES3P2-201ENST00000407942 482 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 ATG3P1-201ENST00000419507 911 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 AL390023.1-201ENST00000428836 262 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.88□□□□□ -1.95
CHMP2AO43633 MTND4P15-201ENST00000437913 1033 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 OR6K5P-201ENST00000447050 945 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 SNRPGP6-201ENST00000451124 220 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 OR6K1P-201ENST00000456766 971 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 RPS3P1-201ENST00000456781 192 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 RPL21P39-201ENST00000463605 483 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 AC011979.1-201ENST00000472300 483 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 RPL21P93-201ENST00000480465 489 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 AC233702.1-201ENST00000482905 502 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 RN7SL297P-201ENST00000483161 293 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 AC087190.1-201ENST00000484462 480 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 AC093591.1-201ENST00000491435 481 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 RPL21P16-201ENST00000495531 483 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 AP000889.1-201ENST00000530968 660 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.88□□□□□ -1.95
CHMP2AO43633 AC125611.2-201ENST00000551907 647 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.88□□□□□ -1.95
CHMP2AO43633 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.88□□□□□ -1.95
CHMP2AO43633 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.88□□□□□ -1.95
CHMP2AO43633 AL133507.1-201ENST00000605269 557 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 AC026790.2-201ENST00000606282 430 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 MFSD8-245ENST00000641743 948 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CHMP2AO43633 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.88□□□□□ -1.95
CHMP2AO43633 NUP58P1-201ENST00000502546 1738 ntBASIC2.88□□□□□ -1.95
CHMP2AO43633 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.88□□□□□ -1.95
CHMP2AO43633 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.87□□□□□ -1.95
CHMP2AO43633 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms