Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 DUXAP4-201ENST00000603046 613 ntBASIC4.54□□□□□ -1.68
PRPF3O43395 AC007038.2-201ENST00000608095 740 ntBASIC4.54□□□□□ -1.68
PRPF3O43395 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.54□□□□□ -1.68
PRPF3O43395 AL355472.4-201ENST00000610233 626 ntBASIC4.54□□□□□ -1.68
PRPF3O43395 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.54□□□□□ -1.68
PRPF3O43395 MIR6500-201ENST00000622700 86 ntBASIC4.54□□□□□ -1.68
PRPF3O43395 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.54□□□□□ -1.68
PRPF3O43395 AC099654.13-201ENST00000639774 207 ntBASIC4.54□□□□□ -1.68
PRPF3O43395 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.54□□□□□ -1.68
PRPF3O43395 UBE3AP2-201ENST00000429033 2259 ntBASIC4.54□□□□□ -1.68
PRPF3O43395 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PRPF3O43395 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
PRPF3O43395 IPO8P1-201ENST00000455509 3109 ntBASIC4.54□□□□□ -1.68
PRPF3O43395 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PRPF3O43395 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRPF3O43395 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.53□□□□□ -1.68
PRPF3O43395 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRPF3O43395 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PRPF3O43395 RNU6-629P-201ENST00000384061 103 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 MIR135A2-201ENST00000384854 100 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PRPF3O43395 RNU6-248P-201ENST00000410720 107 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 RNU2-71P-201ENST00000411395 189 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.53□□□□□ -1.68
PRPF3O43395 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.53□□□□□ -1.68
PRPF3O43395 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.53□□□□□ -1.68
PRPF3O43395 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.53□□□□□ -1.68
PRPF3O43395 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.53□□□□□ -1.68
PRPF3O43395 RANP8-201ENST00000444720 713 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.53□□□□□ -1.68
PRPF3O43395 SNRPGP5-201ENST00000456003 220 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 snoU13.4-201ENST00000458916 104 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.53□□□□□ -1.68
PRPF3O43395 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.53□□□□□ -1.68
PRPF3O43395 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PRPF3O43395 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.53□□□□□ -1.68
PRPF3O43395 AP000857.1-201ENST00000532151 543 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 OR8R1P-201ENST00000543943 764 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 AC107016.1-201ENST00000550463 337 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.53□□□□□ -1.68
PRPF3O43395 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.53□□□□□ -1.68
PRPF3O43395 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.53□□□□□ -1.68
PRPF3O43395 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.53□□□□□ -1.68
PRPF3O43395 BNIP3P5-201ENST00000562290 498 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 AC087481.2-201ENST00000565492 330 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.53□□□□□ -1.68
PRPF3O43395 AC067959.1-201ENST00000604334 379 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 AC090578.1-201ENST00000604955 591 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 AL592436.1-201ENST00000605135 558 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 NDUFA8P1-201ENST00000605525 367 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 AL591424.2-201ENST00000617023 128 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 AC068831.8-201ENST00000620171 435 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 AC012150.2-201ENST00000621300 544 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 AL353748.2-201ENST00000622148 471 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 AC068724.3-201ENST00000625906 87 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 AC095050.2-201ENST00000510748 1458 ntBASIC4.53□□□□□ -1.68
PRPF3O43395 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PRPF3O43395 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
PRPF3O43395 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRPF3O43395 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRPF3O43395 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PRPF3O43395 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PRPF3O43395 SDAD1P2-201ENST00000441308 2028 ntBASIC4.52□□□□□ -1.69
PRPF3O43395 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PRPF3O43395 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PRPF3O43395 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PRPF3O43395 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.52□□□□□ -1.69
PRPF3O43395 AL109755.1-201ENST00000401791 649 ntBASIC4.52□□□□□ -1.69
PRPF3O43395 ATP5HP2-201ENST00000433885 485 ntBASIC4.52□□□□□ -1.69
PRPF3O43395 AL136380.1-201ENST00000447970 162 ntBASIC4.52□□□□□ -1.69
PRPF3O43395 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.52□□□□□ -1.69
PRPF3O43395 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.52□□□□□ -1.69
PRPF3O43395 AC026726.1-201ENST00000512859 601 ntBASIC4.52□□□□□ -1.69
PRPF3O43395 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.52□□□□□ -1.69
PRPF3O43395 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
PRPF3O43395 RNU6-405P-201ENST00000516637 110 ntBASIC4.52□□□□□ -1.69
PRPF3O43395 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.52□□□□□ -1.69
PRPF3O43395 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.52□□□□□ -1.69
PRPF3O43395 AC120057.2-201ENST00000571520 271 ntBASIC4.52□□□□□ -1.69
PRPF3O43395 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.52□□□□□ -1.69
PRPF3O43395 MIR3146-201ENST00000580367 79 ntBASIC4.52□□□□□ -1.69
PRPF3O43395 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.52□□□□□ -1.69
PRPF3O43395 AC025946.2-201ENST00000603398 234 ntBASIC4.52□□□□□ -1.69
PRPF3O43395 AC008277.2-201ENST00000605196 797 ntBASIC4.52□□□□□ -1.69
PRPF3O43395 AL359740.1-201ENST00000624340 592 ntBASIC4.52□□□□□ -1.69
PRPF3O43395 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PRPF3O43395 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.51□□□□□ -1.69
PRPF3O43395 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PRPF3O43395 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.51□□□□□ -1.69
PRPF3O43395 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.51□□□□□ -1.69
PRPF3O43395 MIR19A-201ENST00000384878 82 ntBASIC4.51□□□□□ -1.69
PRPF3O43395 MIR199A2-201ENST00000385289 110 ntBASIC4.51□□□□□ -1.69
PRPF3O43395 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PRPF3O43395 AL136372.1-201ENST00000403060 228 ntBASIC4.51□□□□□ -1.69
PRPF3O43395 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PRPF3O43395 MTCO1P39-201ENST00000426148 480 ntBASIC4.51□□□□□ -1.69
PRPF3O43395 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.51□□□□□ -1.69
PRPF3O43395 AC087650.1-201ENST00000431445 468 ntBASIC4.51□□□□□ -1.69
PRPF3O43395 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms