Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 HIGD1AP17-201ENST00000554576 276 ntBASIC3.04□□□□□ -1.92
CDX4O14627 AC009101.1-201ENST00000568135 242 ntBASIC3.04□□□□□ -1.92
CDX4O14627 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.04□□□□□ -1.92
CDX4O14627 HMGB1P6-201ENST00000569046 646 ntBASIC3.04□□□□□ -1.92
CDX4O14627 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.04□□□□□ -1.92
CDX4O14627 AL451074.6-201ENST00000608512 729 ntBASIC3.04□□□□□ -1.92
CDX4O14627 AP001521.1-201ENST00000609150 300 ntBASIC3.04□□□□□ -1.92
CDX4O14627 AC009318.4-201ENST00000620496 486 ntBASIC3.04□□□□□ -1.92
CDX4O14627 AP000676.3-201ENST00000623299 569 ntBASIC3.04□□□□□ -1.92
CDX4O14627 AC120349.2-201ENST00000625002 298 ntBASIC3.04□□□□□ -1.92
CDX4O14627 AC010149.2-201ENST00000637608 315 ntBASIC3.04□□□□□ -1.92
CDX4O14627 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.04□□□□□ -1.92
CDX4O14627 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CDX4O14627 USP8P1-201ENST00000494673 3183 ntBASIC3.04□□□□□ -1.92
CDX4O14627 AL359893.1-201ENST00000447628 1580 ntBASIC3.04□□□□□ -1.92
CDX4O14627 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
CDX4O14627 AC018555.1-201ENST00000567548 1980 ntBASIC3.03□□□□□ -1.92
CDX4O14627 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.03□□□□□ -1.92
CDX4O14627 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.03□□□□□ -1.92
CDX4O14627 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CDX4O14627 HSPA8P1-201ENST00000425843 1833 ntBASIC3.03□□□□□ -1.92
CDX4O14627 AF127577.6-201ENST00000623352 2191 ntBASIC3.03□□□□□ -1.92
CDX4O14627 AC062016.1-201ENST00000355719 319 ntBASIC3.03□□□□□ -1.92
CDX4O14627 SNORD116-8-201ENST00000384365 95 ntBASIC3.03□□□□□ -1.92
CDX4O14627 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.03□□□□□ -1.92
CDX4O14627 MTND2P18-201ENST00000419962 1030 ntBASIC3.03□□□□□ -1.92
CDX4O14627 PTP4A1P5-201ENST00000420305 455 ntBASIC3.03□□□□□ -1.92
CDX4O14627 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.03□□□□□ -1.92
CDX4O14627 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.03□□□□□ -1.92
CDX4O14627 TXNL1P1-201ENST00000429528 554 ntBASIC3.03□□□□□ -1.92
CDX4O14627 SKP1P1-201ENST00000438081 489 ntBASIC3.03□□□□□ -1.92
CDX4O14627 AC092427.1-201ENST00000439177 601 ntBASIC3.03□□□□□ -1.92
CDX4O14627 MTND2P20-201ENST00000440805 661 ntBASIC3.03□□□□□ -1.92
CDX4O14627 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.03□□□□□ -1.92
CDX4O14627 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.03□□□□□ -1.92
CDX4O14627 ART2BP-201ENST00000453501 499 ntBASIC3.03□□□□□ -1.92
CDX4O14627 MTCO3P20-201ENST00000454926 688 ntBASIC3.03□□□□□ -1.92
CDX4O14627 MTND1P16-201ENST00000465177 898 ntBASIC3.03□□□□□ -1.92
CDX4O14627 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.03□□□□□ -1.92
CDX4O14627 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.03□□□□□ -1.92
CDX4O14627 OR5H5P-201ENST00000503164 928 ntBASIC3.03□□□□□ -1.92
CDX4O14627 AC093767.1-201ENST00000504523 156 ntBASIC3.03□□□□□ -1.92
CDX4O14627 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.03□□□□□ -1.92
CDX4O14627 NDUFB4P9-201ENST00000511646 388 ntBASIC3.03□□□□□ -1.92
CDX4O14627 AC008837.2-201ENST00000513076 418 ntBASIC3.03□□□□□ -1.92
CDX4O14627 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.03□□□□□ -1.92
CDX4O14627 FABP5P12-201ENST00000515543 389 ntBASIC3.03□□□□□ -1.92
CDX4O14627 RNU5A-4P-201ENST00000516588 111 ntBASIC3.03□□□□□ -1.92
CDX4O14627 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.03□□□□□ -1.92
CDX4O14627 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.03□□□□□ -1.92
CDX4O14627 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.03□□□□□ -1.92
CDX4O14627 COX6CP8-201ENST00000522620 226 ntBASIC3.03□□□□□ -1.92
CDX4O14627 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.03□□□□□ -1.92
CDX4O14627 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CDX4O14627 SLC2A13P1-201ENST00000531560 322 ntBASIC3.03□□□□□ -1.92
CDX4O14627 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
CDX4O14627 NBEAP1-201ENST00000554452 979 ntBASIC3.03□□□□□ -1.92
CDX4O14627 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.03□□□□□ -1.92
CDX4O14627 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CDX4O14627 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.03□□□□□ -1.92
CDX4O14627 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.03□□□□□ -1.92
CDX4O14627 AC090616.5-202ENST00000582111 297 ntBASIC3.03□□□□□ -1.92
CDX4O14627 VN1R90P-201ENST00000595717 726 ntBASIC3.03□□□□□ -1.92
CDX4O14627 Z94722.1-201ENST00000604328 474 ntBASIC3.03□□□□□ -1.92
CDX4O14627 ATP1B3P1-201ENST00000605365 821 ntBASIC3.03□□□□□ -1.92
CDX4O14627 MIR486-1-201ENST00000612171 68 ntBASIC3.03□□□□□ -1.92
CDX4O14627 AC090116.1-201ENST00000615679 446 ntBASIC3.03□□□□□ -1.92
CDX4O14627 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.03□□□□□ -1.92
CDX4O14627 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CDX4O14627 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
CDX4O14627 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.03□□□□□ -1.92
CDX4O14627 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.03□□□□□ -1.92
CDX4O14627 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CDX4O14627 AC104454.1-201ENST00000421341 1401 ntBASIC3.02□□□□□ -1.93
CDX4O14627 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDX4O14627 FAM35DP-201ENST00000323387 2712 ntBASIC3.02□□□□□ -1.93
CDX4O14627 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.02□□□□□ -1.93
CDX4O14627 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDX4O14627 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDX4O14627 MIR22-201ENST00000362190 85 ntBASIC3.02□□□□□ -1.93
CDX4O14627 SNORD113-6-201ENST00000363345 75 ntBASIC3.02□□□□□ -1.93
CDX4O14627 RNU6-657P-201ENST00000383904 107 ntBASIC3.02□□□□□ -1.93
CDX4O14627 RNU6-339P-201ENST00000384310 107 ntBASIC3.02□□□□□ -1.93
CDX4O14627 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.02□□□□□ -1.93
CDX4O14627 AL356968.1-201ENST00000416622 474 ntBASIC3.02□□□□□ -1.93
CDX4O14627 AC009518.2-201ENST00000418056 731 ntBASIC3.02□□□□□ -1.93
CDX4O14627 AL035410.1-201ENST00000427409 427 ntBASIC3.02□□□□□ -1.93
CDX4O14627 RPL23AP74-201ENST00000437246 471 ntBASIC3.02□□□□□ -1.93
CDX4O14627 MTND4P6-201ENST00000438297 472 ntBASIC3.02□□□□□ -1.93
CDX4O14627 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.02□□□□□ -1.93
CDX4O14627 AL109933.2-201ENST00000452651 260 ntBASIC3.02□□□□□ -1.93
CDX4O14627 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.02□□□□□ -1.93
CDX4O14627 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.02□□□□□ -1.93
CDX4O14627 ATG12P2-201ENST00000456830 416 ntBASIC3.02□□□□□ -1.93
CDX4O14627 CEACAMP4-201ENST00000457676 421 ntBASIC3.02□□□□□ -1.93
CDX4O14627 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.02□□□□□ -1.93
CDX4O14627 MTND2P14-201ENST00000482139 351 ntBASIC3.02□□□□□ -1.93
CDX4O14627 BET1P1-201ENST00000482276 359 ntBASIC3.02□□□□□ -1.93
CDX4O14627 RPS4XP13-201ENST00000483219 789 ntBASIC3.02□□□□□ -1.93
CDX4O14627 ACTG1P13-201ENST00000486987 1043 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms