Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RNU6ATAC-201ENST00000408749 126 ntBASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 PGBD4P6-201ENST00000421501 610 ntBASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 HMGN2P19-201ENST00000425149 265 ntBASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 AL160175.1-201ENST00000428124 247 ntBASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 AL356867.1-201ENST00000429623 299 ntBASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 AC004383.1-201ENST00000438135 289 ntBASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 RPS29P22-201ENST00000472363 168 ntBASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 AC117394.1-201ENST00000477323 567 ntBASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 RN7SKP283-201ENST00000517197 270 ntBASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 CBX3P4-201ENST00000538909 354 ntBASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 AC092470.1-201ENST00000546187 132 ntBASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 POLR2KP1-201ENST00000553226 168 ntBASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 AC011260.1-201ENST00000578420 472 ntBASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 MIR4287-201ENST00000579398 78 ntBASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 AC005498.1-201ENST00000592125 465 ntBASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 YPEL5P2-201ENST00000605553 359 ntBASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 AC013562.2-201ENST00000611632 603 ntBASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 CPD-202ENST00000543464 4007 ntTSL 2 BASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 ANKRD36BP1-201ENST00000358576 1779 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 SNORA63.1-201ENST00000362493 131 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 RNU6-234P-201ENST00000365229 104 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 RNU4-31P-201ENST00000384211 141 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 RNU6-997P-201ENST00000384725 107 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AL049693.1-201ENST00000402760 611 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AL359511.1-201ENST00000402970 211 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AC016712.1-201ENST00000431088 378 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 IFNA20P-201ENST00000436840 528 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AL500527.1-201ENST00000448532 255 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 TEX41-209ENST00000451478 452 ntTSL 2 BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 RPL23AP3-201ENST00000453844 468 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 CDC42P1-201ENST00000456658 548 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 RPL7P18-201ENST00000478965 734 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 RPL32P9-201ENST00000487963 407 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AC068781.1-201ENST00000488231 618 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 PRELID3BP5-201ENST00000508612 460 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AC093281.2-201ENST00000510153 597 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 EIF4EP5-201ENST00000528228 640 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 SERPINE4P-201ENST00000554978 281 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AL049870.4-201ENST00000555741 486 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AL020997.2-201ENST00000602607 184 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AL513477.2-201ENST00000607858 568 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AL590099.1-201ENST00000615276 138 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AC005296.1-201ENST00000616145 209 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 OFD1P5Y-201ENST00000447585 2590 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 ZNF833P-201ENST00000424938 1494 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AC103710.2-202ENST00000641454 2853 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 AC080128.1-201ENST00000474389 1917 ntBASIC1.17□□□□□ -2.22
CHKB-CPT1BH3BT56 TPTE2P4-201ENST00000258589 1605 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 FTLP6-201ENST00000355274 422 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 RNU4-42P-201ENST00000364738 142 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 CYCSP45-201ENST00000402289 315 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 RNA5SP489-201ENST00000410986 109 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 AC096664.2-201ENST00000411843 406 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 AC245052.5-201ENST00000416320 649 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 MTCO1P39-201ENST00000426148 480 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 RPL36P19-201ENST00000430744 301 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms