Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 MIR6875-201ENST00000617506 72 ntBASIC3□□□□□ -1.93
SRRM4A7MD48 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3□□□□□ -1.93
SRRM4A7MD48 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3□□□□□ -1.93
SRRM4A7MD48 AC008568.2-201ENST00000623862 2313 ntBASIC3□□□□□ -1.93
SRRM4A7MD48 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3□□□□□ -1.93
SRRM4A7MD48 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3□□□□□ -1.93
SRRM4A7MD48 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SRRM4A7MD48 CUL1P1-201ENST00000509510 2425 ntBASIC3□□□□□ -1.93
SRRM4A7MD48 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3□□□□□ -1.93
SRRM4A7MD48 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SRRM4A7MD48 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SRRM4A7MD48 RNU5A-1-201ENST00000362698 116 ntBASIC2.99□□□□□ -1.93
SRRM4A7MD48 Y_RNA.318-201ENST00000365131 97 ntBASIC2.99□□□□□ -1.93
SRRM4A7MD48 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 HMGB3P23-201ENST00000414981 585 ntBASIC2.99□□□□□ -1.93
SRRM4A7MD48 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 AC016907.1-201ENST00000419483 435 ntBASIC2.99□□□□□ -1.93
SRRM4A7MD48 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 AC011233.1-201ENST00000422812 283 ntBASIC2.99□□□□□ -1.93
SRRM4A7MD48 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 MED14P1-201ENST00000430517 648 ntBASIC2.99□□□□□ -1.93
SRRM4A7MD48 OR4K11P-201ENST00000431829 904 ntBASIC2.99□□□□□ -1.93
SRRM4A7MD48 AC109583.1-201ENST00000432156 268 ntBASIC2.99□□□□□ -1.93
SRRM4A7MD48 RPL7P36-201ENST00000444633 681 ntBASIC2.99□□□□□ -1.93
SRRM4A7MD48 TPT1P12-201ENST00000448968 492 ntBASIC2.99□□□□□ -1.93
SRRM4A7MD48 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 UBE2CP3-201ENST00000502715 450 ntBASIC2.99□□□□□ -1.93
SRRM4A7MD48 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 AC005178.1-201ENST00000508392 440 ntBASIC2.99□□□□□ -1.93
SRRM4A7MD48 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 HIGD1AP5-201ENST00000529959 259 ntBASIC2.99□□□□□ -1.93
SRRM4A7MD48 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SRRM4A7MD48 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 AC008011.1-201ENST00000545989 227 ntBASIC2.99□□□□□ -1.93
SRRM4A7MD48 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 AL121576.1-201ENST00000556055 276 ntBASIC2.99□□□□□ -1.93
SRRM4A7MD48 PARP1P2-201ENST00000556806 195 ntBASIC2.99□□□□□ -1.93
SRRM4A7MD48 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 AC060771.1-201ENST00000582031 164 ntBASIC2.99□□□□□ -1.93
SRRM4A7MD48 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 AC006116.10-201ENST00000591836 581 ntBASIC2.99□□□□□ -1.93
SRRM4A7MD48 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.99□□□□□ -1.93
SRRM4A7MD48 AC107214.2-201ENST00000608204 634 ntBASIC2.99□□□□□ -1.93
SRRM4A7MD48 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 AC008443.7-201ENST00000622195 246 ntBASIC2.99□□□□□ -1.93
SRRM4A7MD48 AL354798.1-201ENST00000622505 329 ntBASIC2.99□□□□□ -1.93
SRRM4A7MD48 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.99□□□□□ -1.93
SRRM4A7MD48 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SRRM4A7MD48 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SRRM4A7MD48 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SRRM4A7MD48 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SRRM4A7MD48 CR383658.2-201ENST00000547576 1525 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SRRM4A7MD48 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SRRM4A7MD48 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SRRM4A7MD48 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SRRM4A7MD48 RPL7P26-201ENST00000333817 754 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 SNORA70.2-201ENST00000364506 135 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
SRRM4A7MD48 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 MORF4L1P6-201ENST00000418771 268 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 ZNF885P-201ENST00000420174 1098 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 PPP1R11P2-201ENST00000423543 382 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 AC002075.2-201ENST00000425207 252 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 RPL7L1P10-201ENST00000427790 463 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 UBE2D3P1-201ENST00000436669 444 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 AC007967.1-201ENST00000455422 1159 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 FAM60DP-201ENST00000524174 632 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 AC008489.1-201ENST00000524271 483 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 CYCSP30-201ENST00000546447 172 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 HSPE1P5-201ENST00000561489 272 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 AC007224.1-201ENST00000564410 144 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 AC009101.1-201ENST00000568135 242 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 AP005136.1-201ENST00000579765 429 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 COX6CP3-201ENST00000580869 223 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms