Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 RPS4XP8-201ENST00000402039 771 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 ATF1P1-201ENST00000406040 927 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 AL513475.1-201ENST00000406602 315 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 AL030996.1-201ENST00000411430 235 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 AL590762.3-201ENST00000436372 640 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 MED6P1-201ENST00000439659 713 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 SNRPGP6-201ENST00000451124 220 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 snoU13.3-201ENST00000459441 104 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 GZMAP1-201ENST00000503054 631 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 RNU4-29P-201ENST00000515943 174 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 RNU6-319P-201ENST00000516025 108 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 RNA5SP200-201ENST00000516360 103 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 AP001804.3-201ENST00000525146 880 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 AP001646.1-201ENST00000527936 915 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 AP000867.2-201ENST00000532468 320 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 AC068339.2-201ENST00000534395 618 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 AC017100.2-201ENST00000584628 355 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 SNORD14A-201ENST00000606526 91 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 AC013562.2-201ENST00000611632 603 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 AL162373.1-201ENST00000620433 407 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 SGO1P2-201ENST00000429458 1589 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 Z99496.1-201ENST00000469424 1477 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.74□□□□□ -2.13
TRAV30A0A087WSZ9 FAM133CP-201ENST00000332869 704 ntBASIC1.74□□□□□ -2.13
TRAV30A0A087WSZ9 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
TRAV30A0A087WSZ9 RNF19BPX-201ENST00000426224 625 ntBASIC1.74□□□□□ -2.13
TRAV30A0A087WSZ9 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.74□□□□□ -2.13
TRAV30A0A087WSZ9 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.74□□□□□ -2.13
TRAV30A0A087WSZ9 UBE2V1P13-201ENST00000436983 439 ntBASIC1.74□□□□□ -2.13
TRAV30A0A087WSZ9 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.74□□□□□ -2.13
TRAV30A0A087WSZ9 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.74□□□□□ -2.13
TRAV30A0A087WSZ9 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.74□□□□□ -2.13
TRAV30A0A087WSZ9 NAP1L1P3-201ENST00000462291 880 ntBASIC1.74□□□□□ -2.13
TRAV30A0A087WSZ9 AC128713.1-201ENST00000471495 306 ntBASIC1.74□□□□□ -2.13
TRAV30A0A087WSZ9 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.74□□□□□ -2.13
TRAV30A0A087WSZ9 AC083923.1-201ENST00000523708 376 ntBASIC1.74□□□□□ -2.13
TRAV30A0A087WSZ9 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.74□□□□□ -2.13
TRAV30A0A087WSZ9 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.74□□□□□ -2.13
TRAV30A0A087WSZ9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.74□□□□□ -2.13
TRAV30A0A087WSZ9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.74□□□□□ -2.13
TRAV30A0A087WSZ9 AL033523.1-201ENST00000605153 153 ntBASIC1.74□□□□□ -2.13
TRAV30A0A087WSZ9 AC046143.2-201ENST00000609789 160 ntBASIC1.74□□□□□ -2.13
TRAV30A0A087WSZ9 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.74□□□□□ -2.13
TRAV30A0A087WSZ9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 OR5H15-201ENST00000383696 930 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 SNORA36C-201ENST00000384289 132 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 MTCO3P12-201ENST00000416718 547 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 AC005005.2-201ENST00000420779 380 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 MTCO1P39-201ENST00000426148 480 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 AL606490.8-201ENST00000441624 319 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 AC108938.1-201ENST00000451204 136 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 RNU6-717P-201ENST00000459076 104 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 RNA5SP233-201ENST00000459153 113 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 EIF4EP3-201ENST00000498782 656 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 NDUFB4P2-201ENST00000509515 391 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 ACTR6P1-201ENST00000514311 1104 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 RNU2-44P-201ENST00000516795 194 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 RNU1-40P-201ENST00000516816 164 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 RNU1-97P-201ENST00000516872 164 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 COX6CP5-201ENST00000527162 228 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 AC118942.1-201ENST00000529674 1035 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 AC234778.2-201ENST00000566241 354 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 BNIP3P22-201ENST00000593399 556 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 AC007938.3-201ENST00000604965 623 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 AC107294.1-201ENST00000609524 467 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 AC091932.3-201ENST00000624223 323 ntBASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV30A0A087WSZ9 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TRAV30A0A087WSZ9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
TRAV30A0A087WSZ9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.72□□□□□ -2.13
TRAV30A0A087WSZ9 RNU6-618P-201ENST00000363518 112 ntBASIC1.72□□□□□ -2.13
TRAV30A0A087WSZ9 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TRAV30A0A087WSZ9 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.72□□□□□ -2.13
TRAV30A0A087WSZ9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms