Protein–RNA interactions for Protein: Q9D6J4

Necab3, N-terminal EF-hand calcium-binding protein 3, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Necab3Q9D6J4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Necab3Q9D6J4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Necab3Q9D6J4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Necab3Q9D6J4 Gm25990-201ENSMUST00000102440 86 ntBASIC16.5■□□□□ 0.23
Necab3Q9D6J4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.5■□□□□ 0.23
Necab3Q9D6J4 Gm12497-201ENSMUST00000138778 237 ntBASIC16.5■□□□□ 0.23
Necab3Q9D6J4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Necab3Q9D6J4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Necab3Q9D6J4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Necab3Q9D6J4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Necab3Q9D6J4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Necab3Q9D6J4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Necab3Q9D6J4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Necab3Q9D6J4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Necab3Q9D6J4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Necab3Q9D6J4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.49■□□□□ 0.23
Necab3Q9D6J4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Necab3Q9D6J4 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.49■□□□□ 0.23
Necab3Q9D6J4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Necab3Q9D6J4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Necab3Q9D6J4 Gm4459-201ENSMUST00000118750 468 ntBASIC16.49■□□□□ 0.23
Necab3Q9D6J4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Necab3Q9D6J4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.49■□□□□ 0.23
Necab3Q9D6J4 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.49■□□□□ 0.23
Necab3Q9D6J4 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.49■□□□□ 0.23
Necab3Q9D6J4 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.49■□□□□ 0.23
Necab3Q9D6J4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Necab3Q9D6J4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Necab3Q9D6J4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Necab3Q9D6J4 Gm5867-201ENSMUST00000063197 592 ntBASIC16.49■□□□□ 0.23
Necab3Q9D6J4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Necab3Q9D6J4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Necab3Q9D6J4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Necab3Q9D6J4 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Necab3Q9D6J4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Necab3Q9D6J4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.48■□□□□ 0.23
Necab3Q9D6J4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Gm9172-201ENSMUST00000212092 954 ntBASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Gm8655-201ENSMUST00000221159 852 ntBASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.48■□□□□ 0.23
Necab3Q9D6J4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Gm7230-201ENSMUST00000173026 815 ntBASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Necab3Q9D6J4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Necab3Q9D6J4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
Necab3Q9D6J4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Necab3Q9D6J4 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.46■□□□□ 0.23
Necab3Q9D6J4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Necab3Q9D6J4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Necab3Q9D6J4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Necab3Q9D6J4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms