Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.14■□□□□ 0.65
LRFN3Q9BTN0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.14■□□□□ 0.65
LRFN3Q9BTN0 AL591684.3-201ENST00000605187 298 ntBASIC19.14■□□□□ 0.65
LRFN3Q9BTN0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.14■□□□□ 0.65
LRFN3Q9BTN0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LRFN3Q9BTN0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.14■□□□□ 0.65
LRFN3Q9BTN0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
LRFN3Q9BTN0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LRFN3Q9BTN0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRFN3Q9BTN0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
LRFN3Q9BTN0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRFN3Q9BTN0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.14■□□□□ 0.65
LRFN3Q9BTN0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRFN3Q9BTN0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 AL645939.2-201ENST00000427340 991 ntBASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN3Q9BTN0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 POM121L3P-201ENST00000419331 1163 ntBASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 AC004832.2-201ENST00000426397 482 ntBASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 VENTXP7-201ENST00000475503 772 ntBASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 AP005901.3-202ENST00000581653 237 ntBASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRFN3Q9BTN0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 MINOS1P3-201ENST00000457048 203 ntBASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 SPCS2P1-201ENST00000561636 679 ntBASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 MIR3917-201ENST00000580971 93 ntBASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 AC124864.1-201ENST00000623408 392 ntBASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN3Q9BTN0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms