Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhb3Q91XZ7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb3Q91XZ7 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb3Q91XZ7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb3Q91XZ7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb3Q91XZ7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb3Q91XZ7 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.34■□□□□ 0.21
Pcdhb3Q91XZ7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb3Q91XZ7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Pcdhb3Q91XZ7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb3Q91XZ7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb3Q91XZ7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdhb3Q91XZ7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb3Q91XZ7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb3Q91XZ7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb3Q91XZ7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Pcdhb3Q91XZ7 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb3Q91XZ7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb3Q91XZ7 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb3Q91XZ7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
Pcdhb3Q91XZ7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb3Q91XZ7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb3Q91XZ7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb3Q91XZ7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb3Q91XZ7 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb3Q91XZ7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb3Q91XZ7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb3Q91XZ7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb3Q91XZ7 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 Mir2861-201ENSMUST00000175539 82 ntBASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb3Q91XZ7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhb3Q91XZ7 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb3Q91XZ7 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb3Q91XZ7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb3Q91XZ7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.32■□□□□ 0.2
Pcdhb3Q91XZ7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.32■□□□□ 0.2
Pcdhb3Q91XZ7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.32■□□□□ 0.2
Pcdhb3Q91XZ7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhb3Q91XZ7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb3Q91XZ7 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb3Q91XZ7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb3Q91XZ7 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb3Q91XZ7 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb3Q91XZ7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb3Q91XZ7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb3Q91XZ7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb3Q91XZ7 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.32■□□□□ 0.2
Pcdhb3Q91XZ7 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhb3Q91XZ7 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb3Q91XZ7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb3Q91XZ7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb3Q91XZ7 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Pcdhb3Q91XZ7 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb3Q91XZ7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb3Q91XZ7 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb3Q91XZ7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb3Q91XZ7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb3Q91XZ7 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.31■□□□□ 0.2
Pcdhb3Q91XZ7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb3Q91XZ7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb3Q91XZ7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb3Q91XZ7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb3Q91XZ7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb3Q91XZ7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb3Q91XZ7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Pcdhb3Q91XZ7 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb3Q91XZ7 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms