Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Uhrf1Q8VDF2 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Uhrf1Q8VDF2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Uhrf1Q8VDF2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Uhrf1Q8VDF2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Uhrf1Q8VDF2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.8■□□□□ 0.28
Uhrf1Q8VDF2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.8■□□□□ 0.28
Uhrf1Q8VDF2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Uhrf1Q8VDF2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Uhrf1Q8VDF2 Gm10175-201ENSMUST00000086013 645 ntBASIC16.8■□□□□ 0.28
Uhrf1Q8VDF2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Uhrf1Q8VDF2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Uhrf1Q8VDF2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Gm25911-201ENSMUST00000157621 56 ntBASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uhrf1Q8VDF2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uhrf1Q8VDF2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uhrf1Q8VDF2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uhrf1Q8VDF2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.78■□□□□ 0.28
Uhrf1Q8VDF2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uhrf1Q8VDF2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Uhrf1Q8VDF2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.78■□□□□ 0.28
Uhrf1Q8VDF2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.78■□□□□ 0.28
Uhrf1Q8VDF2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uhrf1Q8VDF2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uhrf1Q8VDF2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uhrf1Q8VDF2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uhrf1Q8VDF2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Uhrf1Q8VDF2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Uhrf1Q8VDF2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uhrf1Q8VDF2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uhrf1Q8VDF2 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.78■□□□□ 0.28
Uhrf1Q8VDF2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uhrf1Q8VDF2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uhrf1Q8VDF2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uhrf1Q8VDF2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Uhrf1Q8VDF2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Uhrf1Q8VDF2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Uhrf1Q8VDF2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Uhrf1Q8VDF2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.77■□□□□ 0.28
Uhrf1Q8VDF2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.77■□□□□ 0.28
Uhrf1Q8VDF2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Uhrf1Q8VDF2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Uhrf1Q8VDF2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.77■□□□□ 0.28
Uhrf1Q8VDF2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Uhrf1Q8VDF2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Uhrf1Q8VDF2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Uhrf1Q8VDF2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.77■□□□□ 0.28
Uhrf1Q8VDF2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Uhrf1Q8VDF2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Uhrf1Q8VDF2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Uhrf1Q8VDF2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Uhrf1Q8VDF2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Uhrf1Q8VDF2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Uhrf1Q8VDF2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Uhrf1Q8VDF2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Uhrf1Q8VDF2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Uhrf1Q8VDF2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Uhrf1Q8VDF2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Uhrf1Q8VDF2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Uhrf1Q8VDF2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Uhrf1Q8VDF2 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.76■□□□□ 0.27
Uhrf1Q8VDF2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Uhrf1Q8VDF2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Uhrf1Q8VDF2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Uhrf1Q8VDF2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.76■□□□□ 0.27
Uhrf1Q8VDF2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.76■□□□□ 0.27
Uhrf1Q8VDF2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.76■□□□□ 0.27
Uhrf1Q8VDF2 Mir6404-201ENSMUST00000183699 94 ntBASIC16.76■□□□□ 0.27
Uhrf1Q8VDF2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Uhrf1Q8VDF2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Uhrf1Q8VDF2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Uhrf1Q8VDF2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.76■□□□□ 0.27
Uhrf1Q8VDF2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Uhrf1Q8VDF2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Uhrf1Q8VDF2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms