Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc9Q8VC31 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc9Q8VC31 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc9Q8VC31 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc9Q8VC31 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc9Q8VC31 Gm13146-201ENSMUST00000118508 780 ntBASIC19.73■□□□□ 0.75
Ccdc9Q8VC31 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc9Q8VC31 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.73■□□□□ 0.75
Ccdc9Q8VC31 AC159649.2-201ENSMUST00000222984 3223 ntBASIC19.73■□□□□ 0.75
Ccdc9Q8VC31 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc9Q8VC31 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
Ccdc9Q8VC31 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc9Q8VC31 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 Gm13234-201ENSMUST00000120010 747 ntBASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
Ccdc9Q8VC31 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc9Q8VC31 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc9Q8VC31 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc9Q8VC31 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.71■□□□□ 0.75
Ccdc9Q8VC31 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc9Q8VC31 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc9Q8VC31 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc9Q8VC31 Gm37305-201ENSMUST00000195714 4279 ntBASIC19.71■□□□□ 0.75
Ccdc9Q8VC31 Reep4-203ENSMUST00000226563 1444 ntBASIC19.71■□□□□ 0.75
Ccdc9Q8VC31 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc9Q8VC31 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc9Q8VC31 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccdc9Q8VC31 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.71■□□□□ 0.75
Ccdc9Q8VC31 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc9Q8VC31 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc9Q8VC31 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc9Q8VC31 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc9Q8VC31 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc9Q8VC31 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc9Q8VC31 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc9Q8VC31 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc9Q8VC31 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc9Q8VC31 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc9Q8VC31 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc9Q8VC31 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc9Q8VC31 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc9Q8VC31 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc9Q8VC31 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc9Q8VC31 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc9Q8VC31 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc9Q8VC31 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc9Q8VC31 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc9Q8VC31 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc9Q8VC31 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc9Q8VC31 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.69■□□□□ 0.74
Ccdc9Q8VC31 Gm42778-201ENSMUST00000199644 553 ntBASIC19.69■□□□□ 0.74
Ccdc9Q8VC31 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc9Q8VC31 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc9Q8VC31 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc9Q8VC31 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc9Q8VC31 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms