Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RAI1Q7Z5J4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 SPDYE15P-201ENST00000424157 909 ntBASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 ZNF444P1-201ENST00000559497 298 ntBASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.36■□□□□ 0.21
RAI1Q7Z5J4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 AC009237.14-201ENST00000609975 1594 ntBASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 AL121894.2-201ENST00000602977 491 ntBASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 AC093458.2-201ENST00000623150 629 ntBASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 SPDYE13P-201ENST00000445314 798 ntBASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 HYMAI.1-201ENST00000620949 238 ntBASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.35■□□□□ 0.21
RAI1Q7Z5J4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 AP000523.1-201ENST00000398242 1049 ntBASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 IER3-202ENST00000376377 1350 ntBASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RAI1Q7Z5J4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
RAI1Q7Z5J4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.33■□□□□ 0.21
RAI1Q7Z5J4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAI1Q7Z5J4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.33■□□□□ 0.21
RAI1Q7Z5J4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.33■□□□□ 0.21
RAI1Q7Z5J4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RAI1Q7Z5J4 VENTXP5-201ENST00000523979 775 ntBASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms