Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf6bO35451 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf6bO35451 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf6bO35451 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.2□□□□□ -0.14
Atf6bO35451 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf6bO35451 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Atf6bO35451 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf6bO35451 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf6bO35451 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.2□□□□□ -0.14
Atf6bO35451 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf6bO35451 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Atf6bO35451 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf6bO35451 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atf6bO35451 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.19□□□□□ -0.14
Atf6bO35451 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.19□□□□□ -0.14
Atf6bO35451 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Atf6bO35451 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.19□□□□□ -0.14
Atf6bO35451 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.19□□□□□ -0.14
Atf6bO35451 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Atf6bO35451 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6bO35451 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6bO35451 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6bO35451 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6bO35451 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6bO35451 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Atf6bO35451 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.18□□□□□ -0.14
Atf6bO35451 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6bO35451 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Atf6bO35451 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6bO35451 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6bO35451 Gm11355-201ENSMUST00000121120 306 ntBASIC14.18□□□□□ -0.14
Atf6bO35451 AA414768-201ENSMUST00000121924 1257 ntBASIC14.18□□□□□ -0.14
Atf6bO35451 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Atf6bO35451 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6bO35451 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6bO35451 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6bO35451 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6bO35451 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6bO35451 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6bO35451 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.18□□□□□ -0.14
Atf6bO35451 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6bO35451 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6bO35451 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6bO35451 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6bO35451 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Atf6bO35451 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6bO35451 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Atf6bO35451 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6bO35451 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6bO35451 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Atf6bO35451 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.17□□□□□ -0.14
Atf6bO35451 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.17□□□□□ -0.14
Atf6bO35451 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Atf6bO35451 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Atf6bO35451 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Atf6bO35451 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Atf6bO35451 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.17□□□□□ -0.14
Atf6bO35451 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms