Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-1A0A075B606 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-1A0A075B606 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-1A0A075B606 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav13d-1A0A075B606 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Trav13d-1A0A075B606 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-1A0A075B606 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-1A0A075B606 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-1A0A075B606 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-1A0A075B606 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-1A0A075B606 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav13d-1A0A075B606 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-1A0A075B606 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-1A0A075B606 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-1A0A075B606 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-1A0A075B606 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-1A0A075B606 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-1A0A075B606 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-1A0A075B606 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Gm17807-201ENSMUST00000186869 298 ntBASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-1A0A075B606 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms